RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 KLK11Q9UBX7 282 aa8.2□□□□□ -1.1
CCM2-204ENST00000470837 MTFP1Q9UDX5 166 aa8.2□□□□□ -1.1
CCM2-204ENST00000470837 AK3Q9UIJ7 227 aa8.2□□□□□ -1.1
CCM2-204ENST00000470837 MGAT4AQ9UM21 535 aa8.2□□□□□ -1.1
CCM2-204ENST00000470837 TRAV24A0A0B4J272 114 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 TMEM30CPA0ZSE6 113 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 MEIOCA2RUB1 952 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 FOXI3A8MTJ6 420 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 ZNF736B4DX44 427 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 TMPRSS2O15393 492 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 PPIHO43447 177 aaKnown RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 ORC5O43913 435 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 GYPAP02724 150 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 IFNA6P05013 189 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 AMY2BP19961 511 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 OR3A3P47888 321 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 CEBPDP49716 269 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 TMEM33P57088 247 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 TAS2R46P59540 309 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 ARPC4P59998 168 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 IL13RA1P78552 427 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 DYRK1AQ13627 763 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 GRK1Q15835 563 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 CHRFAM7AQ494W8 412 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 ACTBL2Q562R1 376 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 GDPD3Q7L5L3 318 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 LYSMD2Q8IV50 215 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 TMEM185AQ8NFB2 350 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 MARVELD3Q96A59 401 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 SNX22Q96L94 193 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 SDHCQ99643 169 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 OCSTAMPQ9BR26 566 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 DNTTIP1Q9H147 329 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 PPA2Q9H2U2 334 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 ZNF286AQ9HBT8 521 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 MCUBQ9NWR8 336 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 ING3Q9NXR8 418 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 KCNIP1Q9NZI2 227 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 ZNF107Q9UII5 783 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 TRAPPC2LQ9UL33 140 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 PCDHB10Q9UN67 800 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 KCNK7Q9Y2U2 307 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 CACNG2Q9Y698 323 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 USP9XQ93008 2570 aaPredicted RBP8.19□□□□□ -1.1
CCM2-204ENST00000470837 FLNCQ14315 2725 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 PLCE1Q9P212 2302 aa8.19□□□□□ -1.1
CCM2-204ENST00000470837 IGKV1D-17A0A075B6S4 117 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 KIR2DS1A0A191URI9 304 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 NAP1L6A6NFF2 107 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 POM121CA8CG34 1229 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 MGST3O14880 152 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 NDUFB3O43676 98 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 RAB3DO95716 219 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 FCER2P06734 321 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 AKAIN1P0CW23 69 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 TBPP20226 339 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 COL8A2P25067 703 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 LMO1P25800 156 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 COL8A1P27658 744 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 HLA-DMAP28067 261 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 KIR2DS4P43632 304 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ASAH1Q13510 395 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 MEF2DQ14814 521 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 KIR2DS1Q14954 304 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ATXN7L3Q14CW9 347 aaPredicted RBP8.18□□□□□ -1.1
CCM2-204ENST00000470837 TRIM16LQ309B1 348 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 LRRC10Q5BKY1 277 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 RNASE10Q5GAN6 216 aaKnown RBP8.18□□□□□ -1.1
CCM2-204ENST00000470837 KRBOX4Q5JUW0 171 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 FAM201AQ5SY85 155 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 SHEQ5VZ18 495 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 OLFML2AQ68BL7 652 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 STUMQ69YW2 141 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 DCDC5Q6ZRR9 648 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 MOB1BQ7L9L4 216 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 NLRC3Q7RTR2 1065 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 TMEM17Q86X19 198 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 SPICQ8N5J4 248 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 TMEM229BQ8NBD8 167 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 BEST4Q8NFU0 473 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 OR5H2Q8NGV7 314 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 OR4K15Q8NH41 348 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ANGPTL6Q8NI99 470 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ENKURQ8TC29 256 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 TRIM63Q969Q1 353 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 CCL13Q99616 98 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 FAM234AQ9H0X4 552 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 TMEM165Q9HC07 324 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 RAB9BQ9NP90 201 aa8.18□□□□□ -1.1
CCM2-204ENST00000470837 ELF5Q9UKW6 265 aaPredicted RBP8.18□□□□□ -1.1
CCM2-204ENST00000470837 RBMX2Q9Y388 322 aaKnown RBP8.18□□□□□ -1.1
CCM2-204ENST00000470837 ROS1P08922 2347 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 SPTAN1Q13813 2472 aaKnown RBP8.17□□□□□ -1.1
CCM2-204ENST00000470837 LRRK2Q5S007 2527 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 MEIKINA0A087WXM9 373 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 FAM240BA0A1B0GVZ2 78 aa8.17□□□□□ -1.1
CCM2-204ENST00000470837 ANKRD20A5PA0PJZ0 165 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms