RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PCDHB16Q9NRJ7 776 aa7□□□□□ -1.29
GTF3A-206ENST00000470606 CISD1Q9NZ45 108 aaKnown RBP7□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF107Q9UII5 783 aaPredicted RBP7□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF221Q9UK13 617 aa7□□□□□ -1.29
GTF3A-206ENST00000470606 RNF115Q9Y4L5 304 aa7□□□□□ -1.29
GTF3A-206ENST00000470606 ABCA12Q86UK0 2595 aa7□□□□□ -1.29
GTF3A-206ENST00000470606 IGKV1D-17A0A075B6S4 117 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 TRAV39A0A0B4J263 110 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 hCG_1807616A0A1W2PRN6 198 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 NAP1L6A6NFF2 107 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 CENPXA8MT69 81 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 INMT-MINDY4F8WBC2 141 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 SIRPB1O00241 398 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 SDCBPO00560 298 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 NDUFB6O95139 128 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 AMY2AP04746 511 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ADH4P08319 380 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 TNFAIP6P98066 277 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 IL13RA2Q14627 380 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 SWI5Q1ZZU3 235 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF672Q499Z4 452 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 BTN2A1Q7KYR7 527 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 Q8IYB0 196 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 OR4K15Q8NH41 348 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 CREB3L1Q96BA8 519 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 DPCDQ9BVM2 203 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 IFT46Q9NQC8 304 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF701Q9NV72 531 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ALG5Q9Y673 324 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 IGHV3OR15-7A0A075B7D8 119 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 TMEM82A0PJX8 343 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 RFPL4AA6NLU0 287 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 RFPL4AL1F8VTS6 287 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ARPC1BO15143 372 aaKnown RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 HAND1O96004 215 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 HPXP02790 462 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 VSIG10L2P0DP72 767 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 RCC1P18754 421 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 GLRA1P23415 457 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 APOBEC3AP31941 199 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 SELENOVP59797 346 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 AGAP6Q5VW22 663 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF660Q6AZW8 331 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF782Q6ZMW2 699 aaPredicted RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 IDO2Q6ZQW0 420 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 OVCH2Q7RTZ1 564 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 MRPL30Q8TCC3 161 aaKnown RBP6.99□□□□□ -1.29
GTF3A-206ENST00000470606 DEDD2Q8WXF8 326 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 SHARPINQ9H0F6 387 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 PPA2Q9H2U2 334 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 GHITMQ9H3K2 345 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 RHOFQ9HBH0 211 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 OR14J1Q9UGF5 321 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 IL19Q9UHD0 177 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 ZDHHC8Q9ULC8 765 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 NUBP2Q9Y5Y2 271 aa6.99□□□□□ -1.29
GTF3A-206ENST00000470606 A0A0A6YYJ9 748 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 IGKV1-6A0A0C4DH72 117 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 A0A1B0GW55 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 PRSS44E7EML9 344 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 M0R233 179 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DEGS1O15121 323 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 CYB5R3P00387 301 aaPredicted RBP6.98□□□□□ -1.29
GTF3A-206ENST00000470606 CD8AP01732 235 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 CD55P08174 381 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L2P0CJ85 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L3P0CJ86 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L4P0CJ87 422 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L5P0CJ88 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L6P0CJ89 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L7P0CJ90 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 PSG2P11465 335 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 SELLP14151 372 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF44P15621 663 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ANXA7P20073 488 aaKnown RBP6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DTYMKP23919 212 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 LMO1P25800 156 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 HERPUD1Q15011 391 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ARL6IP1Q15041 203 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 EFNB3Q15768 340 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 RNASE10Q5GAN6 216 aaKnown RBP6.98□□□□□ -1.29
GTF3A-206ENST00000470606 SPIN3Q5JUX0 258 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 AADACL3Q5VUY0 350 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4L9Q6RFH8 374 aaPredicted RBP6.98□□□□□ -1.29
GTF3A-206ENST00000470606 C17orf107Q6ZR85 190 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 LINC00596Q86U02 117 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 BOLLQ8N9W6 283 aaKnown RBP6.98□□□□□ -1.29
GTF3A-206ENST00000470606 OR5AP2Q8NGF4 316 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 CHAC2Q8WUX2 184 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 GINS4Q9BRT9 223 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 TMEM165Q9HC07 324 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 C12orf4Q9NQ89 552 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ING3Q9NXR8 418 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 SLC2A8Q9NY64 477 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DUX4Q9UBX2 424 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ANXA10Q9UJ72 324 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 ZNF222Q9UK12 451 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
GTF3A-206ENST00000470606 DOPEY2Q9Y3R5 2298 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms