RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 FAM90A14PP0C7W9 464 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 FAM90A24PP0C7X0 464 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF44P15621 663 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ATP6V1B2P21281 511 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 SLC2A5P22732 501 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 CD34P28906 385 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ERP29P30040 261 aaKnown RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 GLP1RP43220 463 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 MAGEA2P43356 314 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 GPR12P47775 334 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 CDX1P47902 265 aaPredicted RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 REG1BP48304 166 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 FUT6P51993 359 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 CXCR4P61073 352 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 BNIP1Q12981 228 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ATXN7L3Q14CW9 347 aaPredicted RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 KRBOX4Q5JUW0 171 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 SLC35D3Q5M8T2 416 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 OR2T5Q6IEZ7 315 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 DEGS2Q6QHC5 323 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 HDXQ7Z353 690 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 MOB3BQ86TA1 216 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 THNSL2Q86YJ6 484 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ENTHD1Q8IYW4 607 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ELMOD2Q8IZ81 293 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 OR2T29Q8NH02 315 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 OR9G1Q8NH87 305 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 GIPC3Q8TF64 312 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 PPIL3Q9H2H8 161 aaKnown RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 EXOSC4Q9NPD3 245 aaKnown RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 TAS2R3Q9NYW6 316 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 AMMECR1Q9Y4X0 333 aaPredicted RBP7.12□□□□□ -1.27
CCDC171-204ENST00000470191 R4GMQ9 66 aa7.12□□□□□ -1.27
CCDC171-204ENST00000470191 ODAMA1E959 279 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 FUOMA2VDF0 154 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 CCDC182A6NF36 153 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 J3QR06 171 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 CCRL2O00421 344 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 HSPB6O14558 160 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 JTBO76095 146 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 ATP1B3P54709 279 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 ROM1Q03395 351 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 GABPB1Q06547 395 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-204ENST00000470191 FOXE3Q13461 319 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 C17orf58Q2M2W7 97 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF322Q6U7Q0 402 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-204ENST00000470191 Q8IYB0 196 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 RFESDQ8TAC1 157 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 C4orf3Q8WVX3 66 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 ASB17Q8WXJ9 295 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 DCUN1D4Q92564 292 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 CORO2AQ92828 525 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 ITFG2Q969R8 447 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 COQ2Q96H96 371 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 KIRREL1Q96J84 757 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 TBX5Q99593 518 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 GNB4Q9HAV0 340 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 PCDHB16Q9NRJ7 776 aa7.11□□□□□ -1.27
CCDC171-204ENST00000470191 SIRT4Q9Y6E7 314 aaPredicted RBP7.11□□□□□ -1.27
CCDC171-204ENST00000470191 TRBV2A0A0J9YWF9 115 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF729A6NN14 1252 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-204ENST00000470191 M0R129 80 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 OVOL1O14753 267 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SYT7O43581 403 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 HMGN1P05114 100 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ELANEP08246 267 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 GP9P14770 177 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 VDAC1P21796 283 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 RBP2P50120 134 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 INSL3P51460 131 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 GNB1P62873 340 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF616Q08AN1 781 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 MADCAM1Q13477 382 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF146Q15072 292 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SPIN3Q5JUX0 258 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ASPHD1Q5U4P2 390 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 CD300LDQ6UXZ3 194 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 BCDIN3DQ7Z5W3 292 aaKnown RBP7.1□□□□□ -1.27
CCDC171-204ENST00000470191 TMEM179BQ7Z7N9 219 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 HAPLN4Q86UW8 402 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 CATSPERDQ86XM0 798 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SLC35F2Q8IXU6 374 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 YIPF7Q8N8F6 280 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 OR1N2Q8NGR9 330 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 OR10X1Q8NGY0 326 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 EAF1Q96JC9 268 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SPACA5Q96QH8 159 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 HSPB9Q9BQS6 159 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ADI1Q9BV57 179 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 GON7Q9BXV9 100 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 ABCG5Q9H222 651 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 MOB1AQ9H8S9 216 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 EDA2RQ9HAV5 297 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 NEK6Q9HC98 313 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 HMG20AQ9NP66 347 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 TVP23BQ9NYZ1 205 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 NKX1-2Q9UD57 310 aaPredicted RBP7.1□□□□□ -1.27
CCDC171-204ENST00000470191 PSG11Q9UQ72 335 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SNX5Q9Y5X3 404 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms