RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 G3V2T6 193 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A15PP0C7V4 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A13PP0C7W8 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A14PP0C7W9 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A24PP0C7X0 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM106CPP0CH98 169 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 HTR1FP30939 366 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 POLR2IP36954 125 aaKnown RBP9.71□□□□□ -0.86
COL5A1-207ENST00000469093 CEACAM3P40198 252 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 THBS3P49746 956 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 ISL1P61371 349 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 CD69Q07108 199 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 C9orf152Q5JTZ5 239 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 KDM4DQ6B0I6 523 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 UTS2BQ765I0 119 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 RNF144BQ7Z419 303 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF329Q86UD4 541 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 OR10H4Q8NGA5 316 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FGGYQ96C11 551 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 WWC2-AS2Q96NR7 200 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 EXOSC4Q9NPD3 245 aaKnown RBP9.71□□□□□ -0.86
COL5A1-207ENST00000469093 AP4S1Q9Y587 144 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 ODAMA1E959 279 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 OOSP1A8MZH6 123 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 E9PQ18 207 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 KDM4BO94953 1096 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 CSN2P05814 226 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 UBCP0CG48 685 aaKnown RBP9.7□□□□□ -0.86
COL5A1-207ENST00000469093 CGB3P0DN86 165 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 CGB7P0DN87 165 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 FASP25445 335 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 ATP6V1E1P36543 226 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 MNDAP41218 407 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 OR3A4PP47883 348 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 RPL23AP62750 156 aaKnown RBP9.7□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF85Q03923 595 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 SCN1BQ07699 218 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 C17orf58Q2M2W7 97 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 TP53I3Q53FA7 332 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 Q6P435 159 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 C18orf65Q6ZTR6 163 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 LHFPL2Q6ZUX7 228 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 OR51D1Q8NGF3 324 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 OR4D6Q8NGJ1 314 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 DPF1Q92782 380 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 RFT1Q96AA3 541 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 COQ2Q96H96 371 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 COMMD4Q9H0A8 199 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 ING3Q9NXR8 418 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 GNG8Q9UK08 70 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 PCDHGB5Q9Y5G0 923 aa9.7□□□□□ -0.86
COL5A1-207ENST00000469093 SLC33A1O00400 549 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-207ENST00000469093 ISG15P05161 165 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 CCDC159P0C7I6 412 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF44P15621 663 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 PTGFRP43088 359 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 RBM39Q14498 530 aaKnown RBP9.69□□□□□ -0.86
COL5A1-207ENST00000469093 ATP6AP1Q15904 470 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 KRBOX4Q5JUW0 171 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 TMEM244Q5VVB8 128 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 OR2W3Q7Z3T1 314 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 OR5D18Q8NGL1 313 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 DNAH3Q8TD57 4116 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 PYDC1Q8WXC3 89 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 SPSB1Q96BD6 273 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 KIRREL1Q96J84 757 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 NOL4LQ96MY1 436 aaPredicted RBP9.69□□□□□ -0.86
COL5A1-207ENST00000469093 OPALINQ96PE5 141 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 SPACA5Q96QH8 159 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 P2RX4Q99571 388 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF649Q9BS31 505 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 MCRIP2Q9BUT9 160 aaKnown RBP9.69□□□□□ -0.86
COL5A1-207ENST00000469093 MOB4Q9Y3A3 225 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 HSPE1-MOB4S4R3N1 261 aa9.69□□□□□ -0.86
COL5A1-207ENST00000469093 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF729A6NN14 1252 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-207ENST00000469093 DEGS1O15121 323 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 MT-ND2P03891 347 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 SNRNP70P08621 437 aaKnown RBP9.68□□□□□ -0.86
COL5A1-207ENST00000469093 ZNF20P17024 532 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 NFYBP25208 207 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 MYCNOSP40205 109 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 NANOS3P60323 173 aaKnown RBP9.68□□□□□ -0.86
COL5A1-207ENST00000469093 TMED1Q13445 227 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 CDK5R1Q15078 307 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 ZDHHC13Q8IUH4 622 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 CHST4Q8NCG5 386 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 OR8J1Q8NGP2 316 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 OR9G1Q8NH87 305 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 CHPT1Q8WUD6 406 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 RPEQ96AT9 228 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 EME1Q96AY2 570 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 HRASLS5Q96KN8 279 aa9.68□□□□□ -0.86
COL5A1-207ENST00000469093 MBOAT4Q96T53 435 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms