RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TTC3P53804 2025 aa4.24□□□□□ -1.73
SF3B1-207ENST00000468925 CASP8AP2Q9UKL3 1982 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PIKFYVEQ9Y2I7 2098 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 LOC105371242A0A075B767 164 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SAA2-SAA4A0A096LPE2 208 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 IGHV2-26A0A0B4J1V2 119 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 A0A1W2PRS3 328 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 NKX2-6A6NCS4 301 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 VSTM2BA6NLU5 285 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 RBFOX2O43251 390 aaKnown RBP eCLIP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 HCRTO43612 131 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 OR7C2O60412 319 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SMPD2O60906 423 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ALOX12BO75342 701 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MTX2O75431 263 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TBX6O95947 436 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 IGSF6O95976 241 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MT-CO2P00403 227 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 NRASP01111 189 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 KRASP01116 189 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MT-ND6P03923 174 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 THY1P04216 161 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ISG15P05161 165 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 IL9P15248 144 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 FOSL2P15408 326 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 FAHP16930 419 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF28P17035 718 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 IGFBP3P17936 291 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 EGR1P18146 543 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF10P21506 573 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PSMB5P28074 263 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 GCH1P30793 250 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MC5RP33032 325 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 HRH1P35367 487 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 BSGP35613 385 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ACAA2P42765 397 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SLC11A1P49279 550 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CEBPDP49716 269 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 NCBP2P52298 156 aaKnown RBP eCLIP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TAS2R30P59541 319 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 YPEL3P61236 119 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 RPS15P62841 145 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 EFEMP1Q12805 493 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF154Q13106 437 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 OR1Q1Q15612 314 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MSMO1Q15800 293 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 BATFQ16520 125 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ACKR1Q16570 336 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF74Q16587 644 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CDKN3Q16667 212 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 LY6KQ17RY6 165 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PRICKLE4Q2TBC4 344 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PRAMEF20Q5VT98 475 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TRAT1Q6PIZ9 186 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM220Q6QAJ8 160 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM184AQ6ZMB5 413 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MEX3BQ6ZN04 569 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 Q6ZN92 141 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 DPY19L4Q7Z388 723 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF550Q7Z398 422 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CDC20BQ86Y33 519 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 FAM219AQ8IW50 185 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF440Q8IYI8 595 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CMTM1Q8IZ96 169 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SLC22A24Q8N4F4 322 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SIGLECL1Q8N7X8 197 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CCDC71LQ8N9Z2 235 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 DCAF4L2Q8NA75 395 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ADAD2Q8NCV1 583 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CADM4Q8NFZ8 388 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 OR52E2Q8NGJ4 325 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 OR6N2Q8NGY6 317 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MARCH1Q8TCQ1 289 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 LIPHQ8WWY8 451 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CFHR4Q92496 578 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 FAM3CQ92520 227 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SUSD6Q92537 303 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 FGF13Q92913 245 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ADIPOR1Q96A54 375 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ARRDC3Q96B67 414 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 APH1AQ96BI3 265 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF689Q96CS4 500 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ALG14Q96F25 216 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SDSLQ96GA7 329 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 WDYHV1Q96HA8 205 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 C4orf45Q96LM5 186 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 OR2V2Q96R30 315 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TAAR6Q96RI8 345 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PRSS27Q9BQR3 290 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PSMG3Q9BT73 122 aaPredicted RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PKIBQ9C010 78 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 GLIPR2Q9H4G4 154 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 C5orf66Q9H5L9 145 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MED20Q9H944 212 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 MANBALQ9NQG1 85 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PLA2G3Q9NZ20 509 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms