RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SAXO1Q8IYX7 474 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 OR52I1Q8NGK6 324 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 OR4P4Q8NGL7 312 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 NR1H4Q96RI1 486 aaPredicted RBP17.52■□□□□ 0.4
TTC28-204ENST00000468807 RHOFQ9HBH0 211 aa17.52■□□□□ 0.4
TTC28-204ENST00000468807 ODAMA1E959 279 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 MAGEB3O15480 346 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 BAG2O95816 211 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 RPSAP08865 295 aaKnown RBP17.51■□□□□ 0.39
TTC28-204ENST00000468807 CD28P10747 220 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 LMO1P25800 156 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 PTGFRP43088 359 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 SOX2P48431 317 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 BLCAPP62952 87 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 ZNF691Q5VV52 312 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 SATL1Q86VE3 508 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 PQLC1Q8N2U9 271 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 CHST4Q8NCG5 386 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 ZNF596Q8TC21 504 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 GPER1Q99527 375 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 FAM192AQ9GZU8 254 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 FAM118AQ9NWS6 357 aa17.51■□□□□ 0.39
TTC28-204ENST00000468807 SLC33A1O00400 549 aaPredicted RBP17.5■□□□□ 0.39
TTC28-204ENST00000468807 TOR1AO14656 332 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 OPN1MWP04001 364 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 OPN1MW2P0DN77 364 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 OPN1MW3P0DN78 364 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 CD24P25063 80 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 VDAC2P45880 294 aaPredicted RBP17.5■□□□□ 0.39
TTC28-204ENST00000468807 ZP1P60852 638 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 ZSCAN26Q16670 478 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 TMEM95Q3KNT9 176 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 KLHL22Q53GT1 634 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 Q6P435 159 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 HEPN1Q6WQI6 88 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 RTN4RL2Q86UN3 420 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 Q8N2B8 174 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 PARP16Q8N5Y8 322 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 OR4D6Q8NGJ1 314 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 CAPSLQ8WWF8 208 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 STMN2Q93045 179 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 COQ2Q96H96 371 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 ZNF649Q9BS31 505 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 TAS2R3Q9NYW6 316 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 DPM3Q9P2X0 92 aa17.5■□□□□ 0.39
TTC28-204ENST00000468807 G3V4G9 280 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 RAB3AP20336 220 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 GDNFP39905 211 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 ARHGDIBP52566 201 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 GTF2A1P52655 376 aaPredicted RBP17.49■□□□□ 0.39
TTC28-204ENST00000468807 RBM39Q14498 530 aaKnown RBP17.49■□□□□ 0.39
TTC28-204ENST00000468807 Q6ZS46 218 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 ZNF555Q8NEP9 628 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 TNFAIP8L1Q8WVP5 186 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 APH1BQ8WW43 257 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 CORO2AQ92828 525 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 CPNE2Q96FN4 548 aaPredicted RBP17.49■□□□□ 0.39
TTC28-204ENST00000468807 PPIL3Q9H2H8 161 aaKnown RBP17.49■□□□□ 0.39
TTC28-204ENST00000468807 ZNF286AQ9HBT8 521 aa17.49■□□□□ 0.39
TTC28-204ENST00000468807 H0YJX3 145 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 ALDOBP05062 364 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 CSN2P05814 226 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 NFYBP25208 207 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 BRS3P32247 399 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 MTNR1BP49286 362 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 BDH1Q02338 343 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 CDK5R1Q15078 307 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 SMN1Q16637 294 aaKnown RBP17.48■□□□□ 0.39
TTC28-204ENST00000468807 PAN3Q58A45 887 aaKnown RBP17.48■□□□□ 0.39
TTC28-204ENST00000468807 TAS2R4Q9NYW5 299 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 PLXNB1O43157 2135 aa17.48■□□□□ 0.39
TTC28-204ENST00000468807 FAM90A22PA8MWA6 464 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 LEUTXA8MZ59 168 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 EBAG9O00559 213 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 ALX3O95076 343 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 LIMS3P0CW19 117 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 LIMS4P0CW20 117 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 GLP1RP43220 463 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 RSU1Q15404 277 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 OR51A2Q8NGJ7 313 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 OR10K1Q8NGX5 313 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 HAVCR2Q8TDQ0 301 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 CITED2Q99967 270 aaPredicted RBP17.47■□□□□ 0.39
TTC28-204ENST00000468807 MRPS18AQ9NVS2 196 aaKnown RBP17.47■□□□□ 0.39
TTC28-204ENST00000468807 OR6C3Q9NZP0 311 aa17.47■□□□□ 0.39
TTC28-204ENST00000468807 MEIKINA0A087WXM9 373 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 ZNF729A6NN14 1252 aaPredicted RBP17.46■□□□□ 0.39
TTC28-204ENST00000468807 GABRPO00591 440 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 CD2P06729 351 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 CEACAM3P40198 252 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 OR3A4PP47883 348 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 PRRX1P54821 245 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 EMX1Q04741 257 aaPredicted RBP17.46■□□□□ 0.39
TTC28-204ENST00000468807 GPR148Q8TDV2 347 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 R3HDM4Q96D70 268 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 AKR1E2Q96JD6 320 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 JAM3Q9BX67 310 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 MMP28Q9H239 520 aa17.46■□□□□ 0.39
TTC28-204ENST00000468807 SMPD3Q9NY59 655 aaPredicted RBP17.46■□□□□ 0.39
TTC28-204ENST00000468807 IGLV1-47P01700 117 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms