RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF716A6NP11 495 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 M0R296 226 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 DNPH1O43598 174 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 CXCL13O43927 109 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 C1QL1O75973 258 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 FOLR2P14207 255 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 AADACP22760 399 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 ACP1P24666 158 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 FOLR3P41439 243 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 NOVA1P51513 510 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 HERV-K104P61576 105 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 CEACAM16Q2WEN9 425 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 MEX3BQ6ZN04 569 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 BATF2Q8N1L9 274 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 GTF3AQ92664 365 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 FOXB1Q99853 325 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF442Q9H7R0 627 aa13.64□□□□□ -0.23
TSPAN4-211ENST00000468468 NCOR1O75376 2440 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 hCG_38984A0A1B0GV85 526 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 UCP3P55916 312 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 Q6ZPA2 131 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SCRT1Q9BWW7 348 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 OR2H1Q9GZK4 316 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 IL36GQ9NZH8 169 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 BDP1A6H8Y1 2624 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SP9P0CG40 484 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SRD5A2P31213 254 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 UCP2P55851 309 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 KRTAP27-1Q3LI81 207 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 GGNQ86UU5 652 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 SLC35G3Q8N808 338 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 TP53RKQ96S44 253 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 EGLN1Q9GZT9 426 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF391Q9UJN7 358 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 LOXL2Q9Y4K0 774 aa13.63□□□□□ -0.23
TSPAN4-211ENST00000468468 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 M0R036 132 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 NDUFB7P17568 137 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 PAX6P26367 422 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 DEFA6Q01524 100 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 CLINT1Q14677 625 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 CDCP2Q5VXM1 449 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF100Q8IYN0 542 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 HPSE2Q8WWQ2 592 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 P4HTMQ9NXG6 502 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 MED19A0JLT2 244 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 C7orf77A4D0Y5 90 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 OR7C1O76099 320 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 P04436 131 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 NQO2P16083 231 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 FUT3P21217 361 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 OTX2P32243 289 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 ASCL1P50553 236 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 CYB5R2Q6BCY4 276 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 KCNE4Q8WWG9 221 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 C20orf24Q9BUV8 137 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 TMED3Q9Y3Q3 217 aa13.62□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 GNMTQ14749 295 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 DCAF12Q5T6F0 453 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 TIPARPQ7Z3E1 657 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 CALHM1Q8IU99 346 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 OR4D5Q8NGN0 318 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 IP6K3Q96PC2 410 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 C3orf85A0A1B0GTC6 90 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 PPYP01298 95 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 RAB5CP51148 216 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 PCBD1P61457 104 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 SGCZQ96LD1 299 aa13.61□□□□□ -0.23
TSPAN4-211ENST00000468468 A0A1B0GV50 99 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 B4E171 279 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 MPPED1O15442 326 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 OR8U8P0C7N1 319 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 TSPAN7P41732 249 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 NPBWR2P48146 333 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 OR8B8Q15620 311 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 TMEM182Q6ZP80 229 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 SLC25A26Q70HW3 274 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 ZNF611Q8N823 705 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 OR10D3Q8NH80 312 aa13.6□□□□□ -0.23
TSPAN4-211ENST00000468468 GPR35Q9HC97 309 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms