RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 OR10G9Q8NGN4 311 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 OR10G7Q8NGN6 311 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 MAP1LC3BQ9GZQ8 125 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 MS4A5Q9H3V2 200 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 KLK11Q9UBX7 282 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 U3KQ87 197 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 RPS4Y1P22090 263 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 SLC37A1P57057 533 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 YBX1P67809 324 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 PLAURQ03405 335 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 FAHD1Q6P587 224 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 ZNF561Q8N587 486 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 WDR89Q96FK6 387 aaPredicted RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 DPH3Q96FX2 82 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 PCGF1Q9BSM1 259 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 TECRQ9NZ01 308 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 IGHV5-10-1A0A0J9YXX1 117 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 CBY3A6NI87 242 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 PRSS1P07477 247 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 HOXB3P14651 431 aaPredicted RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RSPO4Q2I0M5 234 aaPredicted RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 SLC35E4Q6ICL7 350 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 CCDC144NLQ6NUI1 221 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 WDR73Q6P4I2 378 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 OR5C1Q8NGR4 320 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 DIRC2Q96SL1 478 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 P2RX4Q99571 388 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 A0A1W2PNV4 684 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 C16orf97H3BN30 126 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 PNLIPP16233 465 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 GPR6P46095 362 aaPredicted RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 GUCA2BQ16661 112 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RHBDD2Q6NTF9 364 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 OR2Y1Q8NGV0 311 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 COX14Q96I36 57 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 PYCARD-AS1I3L0S3 204 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 PEX11BO96011 259 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 LOXL3P58215 753 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 TOMM20LQ6UXN7 152 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 TBC1D26Q86UD7 250 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SLC25A42Q86VD7 318 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SMIM4Q8WVI0 70 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 TRDCB7Z8K6 153 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 FCN1O00602 326 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RAC3P60763 192 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RIGQ13278 110 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 ANKRD55Q3KP44 614 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 CLEC9AQ6UXN8 241 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 Q6ZN92 141 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 ZNF547Q8IVP9 402 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RIMKLAQ8IXN7 391 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 OR4P4Q8NGL7 312 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SF3B5Q9BWJ5 86 aaKnown RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 SEC11CQ9BY50 192 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 ZNF768Q9H5H4 540 aaKnown RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SMCHD1A6NHR9 2005 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 GSTZ1O43708 216 aaPredicted RBP7.69□□□□□ -1.18
HPS4-209ENST00000466781 RHBDL1O75783 438 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 ZNF205O95201 554 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 GP1BAP07359 652 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 PATE4P0C8F1 98 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 CD96P40200 585 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 TIAL1Q01085 375 aaKnown RBP eCLIP7.69□□□□□ -1.18
HPS4-209ENST00000466781 IL13RA2Q14627 380 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 GUK1Q16774 197 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 RNFT1Q5M7Z0 435 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SCGB1D4Q6XE38 83 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 SSX8Q7RTT4 187 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 OR10C1Q96KK4 312 aa7.69□□□□□ -1.18
HPS4-209ENST00000466781 IGHV3OR15-7A0A075B7D8 119 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 KCNE1BA0A087WTH5 132 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 IGSF23A1L1A6 192 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 PHOX2AO14813 284 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 TO15178 435 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 CST4P01036 141 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 OR6X1Q8NH79 312 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 PIMREGQ9BSJ6 248 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 MANBALQ9NQG1 85 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 SIRT5Q9NXA8 310 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 LIPGQ9Y5X9 500 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 MYO16Q9Y6X6 1858 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 GCSHP23434 173 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 GGTLC2Q14390 218 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 ZNF658BQ4V348 819 aaPredicted RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 C19orf54Q5BKX5 351 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 FAHD2BQ6P2I3 314 aaPredicted RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 EBLN2Q6P2I7 272 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 THSD4Q6ZMP0 1018 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 PRSS41Q7RTY9 318 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 FLYWCH2Q96CP2 140 aaKnown RBP7.68□□□□□ -1.18
HPS4-209ENST00000466781 FAHD2AQ96GK7 314 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 PRDM14Q9GZV8 571 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 MMP26Q9NRE1 261 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 SIGLEC7Q9Y286 467 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 TMEM210A6NLX4 147 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 CST2P09228 141 aa7.68□□□□□ -1.18
HPS4-209ENST00000466781 OR5AC1P0C628 307 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms