RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 CXCL10P02778 98 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 BCHEP06276 602 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SFTPBP07988 381 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PPIAL4FP0DN26 164 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 UGT2B7P16662 529 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 GPX2P18283 190 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 IL1RNP18510 177 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OMGP23515 440 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CRHBPP24387 322 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 F2RP25116 425 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 HTR2CP28335 458 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 IL2RGP31785 369 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 APLNRP35414 380 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CHI3L1P36222 383 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SLC6A8P48029 635 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 GEMP55040 296 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 UCNP55089 124 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 BIDP55957 195 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SEC61GP60059 68 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NCS1P62166 190 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TBPL1P62380 186 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PAX5Q02548 391 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PNOCQ13519 176 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CLINT1Q14677 625 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 HERPUD1Q15011 391 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TSNQ15631 228 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MAPK14Q16539 360 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM176BQ3YBM2 270 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TFDP3Q5H9I0 405 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CTSL3PQ5NE16 218 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SAXO2Q658L1 398 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM42Q69YG0 159 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 EIF5AL1Q6IS14 154 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 H3F3CQ6NXT2 135 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RNASEKQ6P5S7 137 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SLC39A4Q6P5W5 647 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 FBXW12Q6X9E4 464 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 HACD2Q6Y1H2 254 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ADAMTSL5Q6ZMM2 481 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 AHSA2Q719I0 299 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 DEFB128Q7Z7B8 93 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SLC30A8Q8IWU4 369 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RIMKLAQ8IXN7 391 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 DEFB107AQ8IZN7 70 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 GABRG1Q8N1C3 465 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 JAGN1Q8N5M9 183 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CSNK1A1LQ8N752 337 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RNF148Q8N7C7 305 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 DUSP18Q8NEJ0 188 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OR2Z1Q8NG97 314 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OR10AD1Q8NGE0 317 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OR5D13Q8NGL4 314 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 OR1S1Q8NH92 325 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 M1APQ8TC57 530 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RNASEH2CQ8TDP1 164 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TFB1MQ8WVM0 346 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TNFAIP8L1Q8WVP5 186 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM239Q8WW34 195 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NRGNQ92686 78 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM159Q96B96 161 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SLCO4A1Q96BD0 722 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MRAP2Q96G30 205 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TEX37Q96LM6 180 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 C12orf42Q96LP6 360 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MS4A4EQ96PG1 132 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CPXM1Q96SM3 734 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MARVELD1Q9BSK0 173 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 FAAP24Q9BTP7 215 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ULBP2Q9BZM5 246 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 TLNRD1Q9H1K6 362 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 MED28Q9H204 178 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 SRMSQ9H3Y6 488 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 UBE2ZQ9H832 354 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PLEKHA1Q9HB21 404 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RAB18Q9NP72 206 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NECAP2Q9NVZ3 263 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 JPT1Q9UK76 154 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 NXT1Q9UKK6 140 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 HHLA2Q9UM44 414 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 PDE10AQ9Y233 779 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 FOXA2Q9Y261 457 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ST3GAL6Q9Y274 331 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 EXOSC1Q9Y3B2 195 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 LRRC37A3O60309 1634 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 ALKQ9UM73 1620 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RBBP6Q7Z6E9 1792 aaKnown RBP2.66□□□□□ -1.98
VPS13D-203ENST00000466732 DISP2A7MBM2 1401 aa2.66□□□□□ -1.98
VPS13D-203ENST00000466732 RIMBP3Q9UFD9 1639 aa2.65□□□□□ -1.98
VPS13D-203ENST00000466732 RGPD8O14715 1765 aaPredicted RBP2.65□□□□□ -1.99
VPS13D-203ENST00000466732 RGPD5Q99666 1765 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 MEIKINA0A087WXM9 373 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 KIR2DL5BA0A0G2JN68 375 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 KIR2DL5BA0A0G2JPC4 375 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 OR5H1A6NKK0 313 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 ZFP92A6NM28 416 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 EFCAB9A8MZ26 197 aa2.65□□□□□ -1.99
VPS13D-203ENST00000466732 PPP5D1E7EU14 171 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms