RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 A0A1W2PP11 408 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 hCG_1807616A0A1W2PRN6 198 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 RNF222A6NCQ9 220 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 TPD52L2O43399 206 aaKnown RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 BCL2L11O43521 198 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 NME2P1O60361 137 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SS18L1O75177 396 aaPredicted RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 TRAPPC6AO75865 159 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SYNGR4O95473 234 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ACTL6AO96019 429 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 PMP2P02689 132 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 CRHP06850 196 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 NMBP08949 121 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L2P0CJ85 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L3P0CJ86 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L4P0CJ87 422 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L5P0CJ88 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L6P0CJ89 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4L7P0CJ90 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 B4GALT1P15291 398 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 M6PRP20645 277 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 STARP49675 285 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 RBP2P50120 134 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 FAM3AP98173 230 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ARFRP1Q13795 201 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 RNPS1Q15287 305 aaKnown RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 OR1C1Q15619 314 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 AANATQ16613 207 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 C17orf107Q6ZR85 190 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ACOT7LQ6ZUV0 252 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 GLRX5Q86SX6 157 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ZNF546Q86UE3 836 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SKA3Q8IX90 412 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SAXO1Q8IYX7 474 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 OR5M9Q8NGP3 310 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 OR13G1Q8NGZ3 307 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 COQ8AQ8NI60 647 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 MARCH1Q8TCQ1 289 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ABHD3Q8WU67 409 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 TMEM230Q96A57 120 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 FER1L6-AS2Q96M78 137 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 TTTY12Q9BZ98 90 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 PPA2Q9H2U2 334 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 SAP30LQ9HAJ7 183 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 ACKR4Q9NPB9 350 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 OBP2BQ9NPH6 170 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 DUX4Q9UBX2 424 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 NUP50Q9UKX7 468 aa7.07□□□□□ -1.28
LSG1-206ENST00000466391 NOSIPQ9Y314 301 aaKnown RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 PTPRZ1P23471 2315 aaPredicted RBP7.07□□□□□ -1.28
LSG1-206ENST00000466391 MFSD2BA6NFX1 497 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 MRPL33O75394 65 aaKnown RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 NRASP01111 189 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 LCATP04180 440 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 SERPINA5P05154 406 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 CSN2P05814 226 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 CTSDP07339 412 aaPredicted RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 RPS2P15880 293 aaKnown RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 SERPINA2P20848 420 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 CHATP28329 748 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 AVPR2P30518 371 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 OR3A2P47893 321 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 ATP1B3P54709 279 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 MTCP1P56278 107 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 NAAAQ02083 359 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 SRSF7Q16629 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
LSG1-206ENST00000466391 TSPO2Q5TGU0 170 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 AADACL3Q5VUY0 350 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 SIGIRRQ6IA17 410 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 SPINK14Q6IE38 97 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 Q6ZS49 121 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 HSD17B13Q7Z5P4 300 aaPredicted RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 RTN4RL2Q86UN3 420 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 TMEM251Q8N6I4 163 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 ZFP62Q8NB50 900 aaPredicted RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 ADAD2Q8NCV1 583 aaKnown RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 CSNK2A3Q8NEV1 391 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 AKR7LQ8NHP1 331 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 STOML3Q8TAV4 291 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 PPP1R1CQ8WVI7 109 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 BORCS8Q96FH0 119 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 ZNF845Q96IR2 970 aaPredicted RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 SIGLEC12Q96PQ1 595 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 RTBDNQ9BSG5 229 aaPredicted RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 PDCD10Q9BUL8 212 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 REG4Q9BYZ8 158 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 DNTTIP1Q9H147 329 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 GPR173Q9NS66 373 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 MCTS1Q9ULC4 181 aaKnown RBP7.06□□□□□ -1.28
LSG1-206ENST00000466391 SLC7A11Q9UPY5 501 aa7.06□□□□□ -1.28
LSG1-206ENST00000466391 AHCTF1Q8WYP5 2266 aa7.05□□□□□ -1.28
LSG1-206ENST00000466391 IGKV1-27A0A075B6S5 117 aa7.05□□□□□ -1.28
LSG1-206ENST00000466391 TEX13DA0A0J9YY54 714 aaPredicted RBP7.05□□□□□ -1.28
LSG1-206ENST00000466391 KANTRA0A1W2PQU2 76 aa7.05□□□□□ -1.28
LSG1-206ENST00000466391 ZNF587BE7ETH6 402 aa7.05□□□□□ -1.28
LSG1-206ENST00000466391 F8VVB4 439 aa7.05□□□□□ -1.28
LSG1-206ENST00000466391 F8VWA3 439 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms