RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NUDT16L1Q9BRJ7 211 aaKnown RBP9.27□□□□□ -0.93
VCP-204ENST00000466100 C6orf62Q9GZU0 229 aaPredicted RBP9.27□□□□□ -0.93
VCP-204ENST00000466100 SHARPINQ9H0F6 387 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 PATZ1Q9HBE1 687 aaKnown RBP9.27□□□□□ -0.93
VCP-204ENST00000466100 MXRA5Q9NR99 2828 aa9.27□□□□□ -0.93
VCP-204ENST00000466100 METTL21EPA6NDL7 271 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 SIRPB1O00241 398 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 MFNGO00587 321 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 DEGS1O15121 323 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 TMPRSS2O15393 492 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ADAM20O43506 726 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 CLPXO76031 633 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 WNT2P09544 360 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ZNF44P15621 663 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 RPS2P15880 293 aaKnown RBP9.26□□□□□ -0.93
VCP-204ENST00000466100 FUT3P21217 361 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 CDK2P24941 298 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 BLVRBP30043 206 aaPredicted RBP9.26□□□□□ -0.93
VCP-204ENST00000466100 GABRA2P47869 451 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 PITPNBP48739 271 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 SEC61A1P61619 476 aaKnown RBP9.26□□□□□ -0.93
VCP-204ENST00000466100 PAX5Q02548 391 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 FAM189A2Q15884 450 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 RAB12Q6IQ22 244 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 SLC36A1Q7Z2H8 476 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 SUMF2Q8NBJ7 301 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 WFDC11Q8NEX6 87 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 OR4S1Q8NGB4 309 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 OR10R2Q8NGX6 335 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ST8SIA4Q92187 359 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ARHGAP5-AS1Q96IT6 56 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 FAM234AQ9H0X4 552 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ATG5Q9H1Y0 275 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 NARFLQ9H6Q4 476 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 SPACA1Q9HBV2 294 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.26□□□□□ -0.93
VCP-204ENST00000466100 MIOXQ9UGB7 285 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 GLS2Q9UI32 602 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 HSF4Q9ULV5 492 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 KCNK7Q9Y2U2 307 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 ABCA1O95477 2261 aa9.26□□□□□ -0.93
VCP-204ENST00000466100 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 KIAA1324LA8MWY0 1029 aaPredicted RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 SCGNO76038 276 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 TK1P04183 234 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 CSN2P05814 226 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 GLAP06280 429 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 HIST1H1DP16402 221 aaKnown RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 IL2RGP31785 369 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 MNDAP41218 407 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 SCN1BQ07699 218 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 PAN3Q58A45 887 aaKnown RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 BRICD5Q6PL45 260 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 C6orf201Q7Z4U5 140 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 OR8H2Q8N162 312 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 GAPTQ8N292 157 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 ASCC1Q8N9N2 400 aaKnown RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 OR4M1Q8NGD0 313 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 OR6Q1Q8NGQ2 317 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 RAB3CQ96E17 227 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 NEIL1Q96FI4 390 aaPredicted RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 COQ2Q96H96 371 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 MED30Q96HR3 178 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 SNX22Q96L94 193 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 Q96MF0 132 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 DPCDQ9BVM2 203 aaPredicted RBP9.25□□□□□ -0.93
VCP-204ENST00000466100 PECRQ9BY49 303 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 CHST6Q9GZX3 395 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 PPA2Q9H2U2 334 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 PEX16Q9Y5Y5 336 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
VCP-204ENST00000466100 A8MXK9 166 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 H3BUI4 141 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 DVL1O14640 695 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 RGS5O15539 181 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 XRCC3O43542 346 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 USF1P22415 310 aaPredicted RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 TNFSF8P32971 234 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 KCNJ3P48549 501 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 TAS2R20P59543 309 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 LOXL1Q08397 574 aaPredicted RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 ZNF260Q3ZCT1 412 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 ATAD3CQ5T2N8 411 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 RSBN1Q5VWQ0 802 aaPredicted RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 WDR25Q64LD2 544 aaPredicted RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 OLFML2AQ68BL7 652 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 CNIH2Q6PI25 160 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 Q6ZPA2 131 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 CCDC190Q86UF4 302 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 IZUMO1Q8IYV9 350 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 TMEM185AQ8NFB2 350 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 OR8B3Q8NGG8 313 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 PLPPR1Q8TBJ4 325 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 DYRK2Q92630 601 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 S100A16Q96FQ6 103 aaKnown RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 C1orf159Q96HA4 380 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 OR8B2Q96RD0 313 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms