RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 AUNIPQ9H7T9 357 aa4.61□□□□□ -1.67
VPS41-211ENST00000466017 RCC2Q9P258 522 aaKnown RBP4.61□□□□□ -1.67
VPS41-211ENST00000466017 MYEF2Q9P2K5 600 aaKnown RBP4.61□□□□□ -1.67
VPS41-211ENST00000466017 MTFP1Q9UDX5 166 aa4.61□□□□□ -1.67
VPS41-211ENST00000466017 POU2F3Q9UKI9 436 aa4.61□□□□□ -1.67
VPS41-211ENST00000466017 ANAPC10Q9UM13 185 aa4.61□□□□□ -1.67
VPS41-211ENST00000466017 SLC45A2Q9UMX9 530 aa4.61□□□□□ -1.67
VPS41-211ENST00000466017 TRAV18A0A075B6X5 111 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 A0A0A6YYD4 124 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 TRBV6-6A0A0A6YYG2 114 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 A0A1W2PP11 408 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 NAP1L6A6NFF2 107 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ZSCAN5BA6NJL1 495 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 F5H5P2 479 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 C19orf84I3L1E1 186 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 J3QRK9 145 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 M0R233 179 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 MFNGO00587 321 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CDIPTO14735 213 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 HS3ST1O14792 307 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SOCS1O15524 211 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SPRY1O43609 319 aaPredicted RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 SYNGR1O43759 233 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ANGPTL7O43827 346 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 PDCD6O75340 191 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CRTAPO75718 401 aaPredicted RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 RBBP9O75884 186 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 DANCRP0C864 163 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 IL7P13232 177 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 HIST1H1DP16402 221 aaKnown RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 CHATP28329 748 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 BLVRBP30043 206 aaPredicted RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 NPBWR2P48146 333 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 VEGFCP49767 419 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 RBM11P57052 281 aaKnown RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 MRPS11P82912 194 aaKnown RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 TNFAIP6P98066 277 aaPredicted RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 TLE4Q04727 773 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FOXI1Q12951 378 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 PLA2G7Q13093 441 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CDNFQ49AH0 187 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 PYDC2Q56P42 97 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SPIN3Q5JUX0 258 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 TMEM69Q5SWH9 247 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
VPS41-211ENST00000466017 AGAP6Q5VW22 663 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SIGIRRQ6IA17 410 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 OR10K2Q6IF99 312 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 Q6P435 159 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 WDR82Q6UXN9 313 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ACP7Q6ZNF0 438 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 Q6ZS49 121 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FAM58AQ8N1B3 248 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FBXL14Q8N1E6 418 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 GAPTQ8N292 157 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 MUC15Q8N387 334 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CHST4Q8NCG5 386 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 C19orf18Q8NEA5 215 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 DUSP18Q8NEJ0 188 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 OR5D18Q8NGL1 313 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 NPRL2Q8WTW4 380 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FCAMRQ8WWV6 532 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ST8SIA4Q92187 359 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 YIPF5Q969M3 257 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 TRIM63Q969Q1 353 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 RAB3CQ96E17 227 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SEH1LQ96EE3 360 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 PIK3IP1Q96FE7 263 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ELMOD3Q96FG2 381 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 SELENOIQ9C0D9 397 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 EGLN1Q9GZT9 426 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CHST6Q9GZX3 395 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 DNTTIP1Q9H147 329 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FN3KRPQ9HA64 309 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 CBLN4Q9NTU7 201 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FAIMQ9NVQ4 179 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 GLS2Q9UI32 602 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 FZR1Q9UM11 496 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ST3GAL6Q9Y274 331 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 KCNK7Q9Y2U2 307 aa4.6□□□□□ -1.67
VPS41-211ENST00000466017 ANKRD20A5PA0PJZ0 165 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 NBASA2RRP1 2371 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 A6NNC1 897 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 SH2D1BO14796 132 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 TNFRSF13BO14836 293 aaPredicted RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 PLA2G10O15496 165 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 SPRY3O43610 288 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 NDUFA2O43678 99 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 ORC5O43913 435 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 RHBDL1O75783 438 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 PLAUP00749 431 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 CD8AP01732 235 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 GRPP07492 148 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 MUC1P15941 1255 aaPredicted RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 BCL3P20749 454 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 SERPINA2P20848 420 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 DTYMKP23919 212 aa4.59□□□□□ -1.67
VPS41-211ENST00000466017 MDH2P40926 338 aaKnown RBP4.59□□□□□ -1.67
VPS41-211ENST00000466017 DEFA1P59665 94 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms