RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 OR2G2Q8NGZ5 317 aa17.95■□□□□ 0.46
USP4-208ENST00000464168 SPSB1Q96BD6 273 aa17.95■□□□□ 0.46
USP4-208ENST00000464168 COQ2Q96H96 371 aa17.95■□□□□ 0.46
USP4-208ENST00000464168 COMMD4Q9H0A8 199 aa17.95■□□□□ 0.46
USP4-208ENST00000464168 PCDHGB5Q9Y5G0 923 aa17.95■□□□□ 0.46
USP4-208ENST00000464168 OOSP1A8MZH6 123 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 KDM4BO94953 1096 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 PTGFRP43088 359 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 OR3A4PP47883 348 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 SCN1BQ07699 218 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 C17orf58Q2M2W7 97 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 CCDC144NLQ6NUI1 221 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 Q6P435 159 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 ZNF329Q86UD4 541 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 ZDHHC13Q8IUH4 622 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 OR4D6Q8NGJ1 314 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 EME1Q96AY2 570 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 OPALINQ96PE5 141 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 CIB1Q99828 191 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 GABARAPL1Q9H0R8 117 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 FRRS1LQ9P0K9 344 aa17.94■□□□□ 0.46
USP4-208ENST00000464168 PSMB11A5LHX3 300 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A18PA6NE21 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A16PA6NEW6 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A20PA6NIJ5 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A9PA6NNJ1 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A12PA8MX19 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A5PA8MXJ8 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 ISG15P05161 165 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 CSN2P05814 226 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A15PP0C7V4 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A13PP0C7W8 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A14PP0C7W9 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM90A24PP0C7X0 464 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM106CPP0CH98 169 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 ZNF20P17024 532 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 MNDAP41218 407 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 CD69Q07108 199 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 TMED1Q13445 227 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 RBM39Q14498 530 aaKnown RBP17.93■□□□□ 0.46
USP4-208ENST00000464168 KRBOX4Q5JUW0 171 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 FAM220AQ7Z4H9 259 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 SPACA5Q96QH8 159 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 MBOAT4Q96T53 435 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 B9D2Q9BPU9 175 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 ING3Q9NXR8 418 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 ENOPH1Q9UHY7 261 aa17.93■□□□□ 0.46
USP4-208ENST00000464168 ZNF44P15621 663 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 THBS3P49746 956 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 NANOS3P60323 173 aaKnown RBP17.92■□□□□ 0.46
USP4-208ENST00000464168 THNSL2Q86YJ6 484 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 CHST4Q8NCG5 386 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 OR5D18Q8NGL1 313 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 OR8J1Q8NGP2 316 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 ZNF649Q9BS31 505 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 GPR61Q9BZJ8 451 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 MOB4Q9Y3A3 225 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 HSPE1-MOB4S4R3N1 261 aa17.92■□□□□ 0.46
USP4-208ENST00000464168 ZNF729A6NN14 1252 aaPredicted RBP17.91■□□□□ 0.46
USP4-208ENST00000464168 E9PQ18 207 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 SLC33A1O00400 549 aaPredicted RBP17.91■□□□□ 0.46
USP4-208ENST00000464168 MT-ND2P03891 347 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 CGB3P0DN86 165 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 CGB7P0DN87 165 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 NFYBP25208 207 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 RPL23AP62750 156 aaKnown RBP17.91■□□□□ 0.46
USP4-208ENST00000464168 FDX2Q6P4F2 183 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 AMIGO2Q86SJ2 522 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 OR51D1Q8NGF3 324 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 OR10AC1Q8NH08 325 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 DPF1Q92782 380 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 PPIL3Q9H2H8 161 aaKnown RBP17.91■□□□□ 0.46
USP4-208ENST00000464168 RHOFQ9HBH0 211 aa17.91■□□□□ 0.46
USP4-208ENST00000464168 KBTBD11-OT1A0A1B0GTJ5 212 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 ATXN7L3Q14CW9 347 aaPredicted RBP17.9■□□□□ 0.46
USP4-208ENST00000464168 CDK5R1Q15078 307 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 C18orf65Q6ZTR6 163 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 OR2W3Q7Z3T1 314 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 SAXO1Q8IYX7 474 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 OR51A4Q8NGJ6 313 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 OR9G1Q8NH87 305 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 RFKQ969G6 155 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 KIRREL1Q96J84 757 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 NOL4LQ96MY1 436 aaPredicted RBP17.9■□□□□ 0.46
USP4-208ENST00000464168 WWC2-AS2Q96NR7 200 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 GABARAPL3Q9BY60 117 aa17.9■□□□□ 0.46
USP4-208ENST00000464168 DEGS1O15121 323 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 SNRNP70P08621 437 aaKnown RBP17.89■□□□□ 0.45
USP4-208ENST00000464168 CCDC159P0C7I6 412 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 OCM2P0CE71 109 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 OCMP0CE72 109 aaPredicted RBP17.89■□□□□ 0.45
USP4-208ENST00000464168 FASP25445 335 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 KCTD20Q7Z5Y7 419 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 OR13C9Q8NGT0 318 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 OR56B4Q8NH76 319 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 RPEQ96AT9 228 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 HRASLS5Q96KN8 279 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 NEK6Q9HC98 313 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 PCDHB16Q9NRJ7 776 aa17.89■□□□□ 0.45
USP4-208ENST00000464168 OR6C3Q9NZP0 311 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms