RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 IL24Q13007 206 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 ZNF273Q14593 569 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 TAF9Q16594 264 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 LRRC10Q5BKY1 277 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 LDLRAD2Q5SZI1 272 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 GPR157Q5UAW9 335 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 LAIR2Q6ISS4 152 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 C16orf87Q6PH81 154 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 C1orf122Q6ZSJ8 110 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 CCDC121Q6ZUS5 278 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 COMMD2Q86X83 199 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 YIPF7Q8N8F6 280 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 RHOXF1Q8NHV9 184 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 TRMT10AQ8TBZ6 339 aaKnown RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 TRUB1Q8WWH5 349 aaKnown RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 RGP1Q92546 391 aaPredicted RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 LGALS12Q96DT0 336 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 DAZAP1Q96EP5 407 aaKnown RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 RNFT2Q96EX2 444 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 PKIBQ9C010 78 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 ISG20L2Q9H9L3 353 aaKnown RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 C1RLQ9NZP8 487 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 ZNRD1Q9P1U0 126 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 ONECUT1Q9UBC0 465 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 DNAJB11Q9UBS4 358 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 GTF2A1LQ9UNN4 478 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 MMP24Q9Y5R2 645 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
CD46-211ENST00000464082 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
CD46-211ENST00000464082 IGKV1-12A0A0C4DH73 117 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 NKX6-3A6NJ46 265 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 K7N7A8 449 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 M0R1W7 72 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 SLC16A6O15403 523 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 SYT7O43581 403 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 IGKV1D-12P01611 117 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 TK1P04183 234 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 UBCP0CG48 685 aaKnown RBP4.31□□□□□ -1.72
CD46-211ENST00000464082 LIMS3P0CW19 117 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 LIMS4P0CW20 117 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 CCL3L1P16619 93 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 PRDX2P32119 198 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 SAA4P35542 130 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 GABRA2P47869 451 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 NPBWR2P48146 333 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 CCR9P51686 369 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 SMIM21Q3B7S5 101 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 MEDAGQ5VYS4 303 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 XAF1Q6GPH4 301 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 FIP1L1Q6UN15 594 aaKnown RBP4.31□□□□□ -1.72
CD46-211ENST00000464082 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 LHFPL2Q6ZUX7 228 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 UTS2BQ765I0 119 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 LHFPL3Q86UP9 236 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ZNF573Q86YE8 665 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 MKXQ8IYA7 352 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ZNF561Q8N587 486 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 TMEM86BQ8N661 226 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ACBD7Q8N6N7 88 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ZNF485Q8NCK3 441 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 TMEM185AQ8NFB2 350 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 OR52N4Q8NGI2 321 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 OR52I1Q8NGK6 324 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ZNF671Q8TAW3 534 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 PIFOQ8TCI5 191 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 NPRL2Q8WTW4 380 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 H1FXQ92522 213 aaKnown RBP4.31□□□□□ -1.72
CD46-211ENST00000464082 SLC25A28Q96A46 364 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 TMIGD2Q96BF3 282 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 C10orf35Q96D05 121 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 MED30Q96HR3 178 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 C4orf36Q96KX1 117 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 C9orf16Q9BUW7 83 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 SEBOXQ9HB31 216 aaPredicted RBP4.31□□□□□ -1.72
CD46-211ENST00000464082 AMBNQ9NP70 447 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 FAM118AQ9NWS6 357 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 RASL12Q9NYN1 266 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.31□□□□□ -1.72
CD46-211ENST00000464082 GNG8Q9UK08 70 aa4.31□□□□□ -1.72
CD46-211ENST00000464082 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.31□□□□□ -1.72
CD46-211ENST00000464082 LOC100130705A0A1B0GUX0 176 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 FAM230AA0A1W2PPH8 454 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 A0A1W2PRD5 423 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 A0A1W2PRF3 423 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 A0A1W2PRM7 423 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 MEX3AA1L020 520 aaKnown RBP4.3□□□□□ -1.72
CD46-211ENST00000464082 ZNF785A8K8V0 405 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 C17orf98A8MV24 154 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 ODF3BA8MYP8 253 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 NPFFO15130 113 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 GPR137BO60478 399 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 MMP23AO75900 390 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 NDUFA7O95182 113 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 CLIC3O95833 236 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 LALBAP00709 142 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 MT-ND2P03891 347 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 NPSP0C0P6 89 aa4.3□□□□□ -1.72
CD46-211ENST00000464082 ATF1P18846 271 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms