RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RAB40BQ12829 278 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 MRPL28Q13084 256 aaKnown RBP15.15■□□□□ 0.02
SF3A1-205ENST00000463818 KISS1Q15726 138 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 HEPN1Q6WQI6 88 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 PARP16Q8N5Y8 322 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OR52I1Q8NGK6 324 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OR4P4Q8NGL7 312 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OR5AK2Q8NH90 309 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OR5M11Q96RB7 305 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 PDCD1LG2Q9BQ51 273 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 GAL3ST2Q9H3Q3 398 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 INPP5EQ9NRR6 644 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 FAM118AQ9NWS6 357 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 DPM3Q9P2X0 92 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 DHDHQ9UQ10 334 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 TGP01266 2768 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 ODAMA1E959 279 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 TMEM212A6NML5 194 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 SULT1B1O43704 296 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 FBXO24O75426 580 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 GDNFP39905 211 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 ZP1P60852 638 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 IL18R1Q13478 541 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 NSUN5P1Q3KNT7 163 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 RTN4RL2Q86UN3 420 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 CHST4Q8NCG5 386 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 DCLRE1BQ9H816 532 aa15.14■□□□□ 0.01
SF3A1-205ENST00000463818 MRPS18AQ9NVS2 196 aaKnown RBP15.14■□□□□ 0.01
SF3A1-205ENST00000463818 SMPD3Q9NY59 655 aaPredicted RBP15.14■□□□□ 0.01
SF3A1-205ENST00000463818 RPL36Q9Y3U8 105 aaKnown RBP15.14■□□□□ 0.01
SF3A1-205ENST00000463818 TET2Q6N021 2002 aaPredicted RBP15.14■□□□□ 0.01
SF3A1-205ENST00000463818 G3V4G9 280 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 SLC33A1O00400 549 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 PEX14O75381 377 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 CCDC159P0C7I6 412 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 BDH1Q02338 343 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 EMX1Q04741 257 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 CDK5R1Q15078 307 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 KLHL22Q53GT1 634 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 ARSJQ5FYB0 599 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 KRBOX4Q5JUW0 171 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 OGFRL1Q5TC84 451 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 ZNF691Q5VV52 312 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 ZNF596Q8TC21 504 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 WIPF2Q8TF74 440 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 TSEN15Q8WW01 171 aaKnown RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 COQ2Q96H96 371 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 NR1H4Q96RI1 486 aaPredicted RBP15.13■□□□□ 0.01
SF3A1-205ENST00000463818 WNT10AQ9GZT5 417 aa15.13■□□□□ 0.01
SF3A1-205ENST00000463818 FAM172BPA6NC97 362 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 CSN2P05814 226 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 CD24P25063 80 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 GTF2A1P52655 376 aaPredicted RBP15.12■□□□□ 0.01
SF3A1-205ENST00000463818 OR4D6Q8NGJ1 314 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 APH1BQ8WW43 257 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 ZNF286AQ9HBT8 521 aa15.12■□□□□ 0.01
SF3A1-205ENST00000463818 LEUTXA8MZ59 168 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 TOR1AO14656 332 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 IGLV1-47P01700 117 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 LIMS3P0CW19 117 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 LIMS4P0CW20 117 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 RAB3AP20336 220 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 CD34P28906 385 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 BRS3P32247 399 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 PTGFRP43088 359 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 VDAC2P45880 294 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-205ENST00000463818 MTNR1BP49286 362 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 ATXN7L3Q14CW9 347 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-205ENST00000463818 C17orf58Q2M2W7 97 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 LPCAT4Q643R3 524 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 ELP2Q6IA86 826 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 SATL1Q86VE3 508 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 CITED2Q99967 270 aaPredicted RBP15.11■□□□□ 0.01
SF3A1-205ENST00000463818 OCSTAMPQ9BR26 566 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 DSCAML1Q8TD84 2053 aa15.11■□□□□ 0.01
SF3A1-205ENST00000463818 ZNF729A6NN14 1252 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-205ENST00000463818 H0YJX3 145 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 MAGEB3O15480 346 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 SOX2P48431 317 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 PRRX1P54821 245 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 SMN1Q16637 294 aaKnown RBP15.1■□□□□ 0.01
SF3A1-205ENST00000463818 BEAN1Q3B7T3 259 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 TMEM95Q3KNT9 176 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 ZNF529Q6P280 563 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 NDUFA11Q86Y39 141 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 PXT1Q8NFP0 134 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 OR51A2Q8NGJ7 313 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 HAVCR2Q8TDQ0 301 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 GPER1Q99527 375 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 MMP28Q9H239 520 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 PPIL3Q9H2H8 161 aaKnown RBP15.1■□□□□ 0.01
SF3A1-205ENST00000463818 FGF20Q9NP95 211 aaPredicted RBP15.1■□□□□ 0.01
SF3A1-205ENST00000463818 OR6C3Q9NZP0 311 aa15.1■□□□□ 0.01
SF3A1-205ENST00000463818 ERICH4A6NGS2 130 aa15.09■□□□□ 0.01
SF3A1-205ENST00000463818 BUB1B-PAK6H3BSN5 160 aa15.09■□□□□ 0.01
SF3A1-205ENST00000463818 WBP4O75554 376 aaKnown RBP15.09■□□□□ 0.01
SF3A1-205ENST00000463818 ALDOBP05062 364 aa15.09■□□□□ 0.01
SF3A1-205ENST00000463818 CGB3P0DN86 165 aa15.09■□□□□ 0.01
SF3A1-205ENST00000463818 CGB7P0DN87 165 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms