RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FAM90A10PA6NDY2 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A18PA6NE21 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A16PA6NEW6 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A20PA6NIJ5 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A8PA6NJQ4 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A7PA6NKC0 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A22PA8MWA6 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A12PA8MX19 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A5PA8MXJ8 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A23PA8MXZ1 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 EEF1E1-BLOC1S5C9J1V9 151 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 SS18L1O75177 396 aaPredicted RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 MRPL33O75394 65 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 SPDEFO95238 335 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A15PP0C7V4 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A13PP0C7W8 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A14PP0C7W9 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM90A24PP0C7X0 464 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 IL15RAQ13261 267 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 RNPS1Q15287 305 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM209AQ5JX71 171 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 VWA1Q6PCB0 445 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 MCEMP1Q8IX19 187 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 CNEP1R1Q8N9A8 125 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 BVESQ8NE79 360 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 OR2AE1Q8NHA4 323 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 C2orf50Q96LR7 162 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ST6GALNAC5Q9BVH7 336 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 NARFLQ9H6Q4 476 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 BCO1Q9HAY6 547 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ELL3Q9HB65 397 aaPredicted RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 MBD2Q9UBB5 411 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 DNAJB11Q9UBS4 358 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ANXA10Q9UJ72 324 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 C14orf166Q9Y224 244 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 DCHS2Q6V1P9 2916 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM25EA8MYX2 175 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 HTR3BO95264 441 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 PET100P0DJ07 73 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 NUP62P37198 522 aaPredicted RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 PDZK1IP1Q13113 114 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 PAN3Q58A45 887 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 TSPO2Q5TGU0 170 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 PRSS54Q6PEW0 395 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.49□□□□□ -1.05
PTPRD-207ENST00000463477 C6orf201Q7Z4U5 140 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 SAXO1Q8IYX7 474 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 OSR2Q8N2R0 312 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FGFBP3Q8TAT2 258 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 ABHD3Q8WU67 409 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 RNF126Q9BV68 326 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 WDR13Q9H1Z4 485 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 C1orf123Q9NWV4 160 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 APCP25054 2843 aa8.49□□□□□ -1.05
PTPRD-207ENST00000463477 FAM230AA0A1W2PPH8 454 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 GABRR1P24046 479 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF92Q03936 586 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 SNTB1Q13884 538 aaKnown RBP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 SRSF7Q16629 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ANKRD55Q3KP44 614 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 PABPC1L2AQ5JQF8 200 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 DPPA2Q7Z7J5 298 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF610Q8N9Z0 462 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 POC1AQ8NBT0 407 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 SLC30A7Q8NEW0 376 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 PIK3IP1Q96FE7 263 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 AQP10Q96PS8 301 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF471Q9BX82 626 aaPredicted RBP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 SHARPINQ9H0F6 387 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 OPA3Q9H6K4 179 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 BARX1Q9HBU1 254 aaPredicted RBP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF701Q9NV72 531 aaPredicted RBP8.48□□□□□ -1.05
PTPRD-207ENST00000463477 NECAP2Q9NVZ3 263 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 ELOVL5Q9NYP7 299 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 PROCRQ9UNN8 238 aa8.48□□□□□ -1.05
PTPRD-207ENST00000463477 CRYM-AS1A6NIL9 109 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF587BE7ETH6 402 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 SDCBPO00560 298 aaPredicted RBP8.47□□□□□ -1.05
PTPRD-207ENST00000463477 FGF16O43320 207 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 IFNA2P01563 188 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 FCGR3AP08637 254 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 GLRA1P23415 457 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 LUMP51884 338 aaPredicted RBP8.47□□□□□ -1.05
PTPRD-207ENST00000463477 UCP3P55916 312 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 SLC9A3R2Q15599 337 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 LRRC37A5PQ49AS3 106 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 ELP2Q6IA86 826 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 Q6ZS49 121 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 TUSC5Q8IXB3 177 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 STPG2Q8N412 459 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 CMSS1Q9BQ75 279 aaKnown RBP8.47□□□□□ -1.05
PTPRD-207ENST00000463477 REPIN1Q9BWE0 567 aaKnown RBP8.47□□□□□ -1.05
PTPRD-207ENST00000463477 OPN3Q9H1Y3 402 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms