RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 CDIPTO14735 213 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TAAR5O14804 337 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 PSPHP1O15172 72 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 PROSCO94903 275 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 SLC25A27O95847 323 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 IGKV1D-16P01601 117 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 SNRPAP09012 282 aaKnown RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 DTYMKP23919 212 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 HOXA9P31269 272 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 APLNRP35414 380 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TUFMP49411 452 aaKnown RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 EIF2B2P49770 351 aaKnown RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 SERPINB9P50453 376 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 GFERP55789 205 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 CRADDP78560 199 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 IFITM3Q01628 133 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 PRKCDQ05655 676 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 NAB1Q13506 487 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 ZNF846Q147U1 533 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 KCNJ8Q15842 424 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 CDNFQ49AH0 187 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 SMUG1Q53HV7 270 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 LPCAT4Q643R3 524 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TMEM205Q6UW68 189 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 C4orf22Q6V702 233 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 C4orf33Q8N1A6 199 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 GAPTQ8N292 157 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 Q8N976 141 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 LINC01555Q8NAE3 123 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 OR51Q1Q8NH59 317 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 UBA3Q8TBC4 463 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 EXOSC8Q96B26 276 aaKnown RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 ISOC1Q96CN7 298 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 PHYHIPLQ96FC7 376 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 RMND5BQ96G75 393 aaPredicted RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 SMARCD1Q96GM5 515 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 BMFQ96LC9 184 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 METTL8Q9H825 291 aaKnown RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 C12orf10Q9HB07 376 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 FBXO6Q9NRD1 293 aaPredicted RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 C1orf109Q9NX04 203 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 RBAKQ9NYW8 714 aaPredicted RBP3.92□□□□□ -1.78
COPS3-205ENST00000463097 ANXA10Q9UJ72 324 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 COQ4Q9Y3A0 265 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 HEY1Q9Y5J3 304 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TNS2Q63HR2 1409 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 TOGARAM1Q9Y4F4 1720 aa3.92□□□□□ -1.78
COPS3-205ENST00000463097 MYH1P12882 1939 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 PLIN4Q96Q06 1357 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 MEGF6O75095 1541 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 A0A1B0GX12 115 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 KRBOX1C9JBD0 128 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 PSMD12O00232 456 aaPredicted RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 TXNDC9O14530 226 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 COPEO14579 308 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 SLC22A5O76082 557 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 KRT75O95678 551 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 APOEP02649 317 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 BPGMP07738 259 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 MARCKSL1P49006 195 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 CCR6P51684 374 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 AQP5P55064 265 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 RAB38P57729 211 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 UBE2IP63279 158 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 CD164Q04900 197 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 KRR1Q13601 381 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 RAB31Q13636 194 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 ZNF239Q16600 458 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 C6orf99Q4VX62 202 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 PCP2Q8IVA1 136 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 SPICQ8N5J4 248 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 RNASEH2CQ8TDP1 164 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 RAB2BQ8WUD1 216 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 C1orf54Q8WWF1 131 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 PYDC1Q8WXC3 89 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 CDS1Q92903 461 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 C12orf43Q96C57 262 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 CEP170P1Q96L14 293 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 TMED9Q9BVK6 235 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 DSN1Q9H410 356 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 WDR54Q9H977 334 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 CXorf21Q9HAI6 301 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 HMG20AQ9NP66 347 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 C12orf4Q9NQ89 552 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 IMP3Q9NV31 184 aaKnown RBP3.91□□□□□ -1.78
COPS3-205ENST00000463097 RNF11Q9Y3C5 154 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 TIMM22Q9Y584 194 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 ORC6Q9Y5N6 252 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 MYH2Q9UKX2 1941 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 LTN1O94822 1766 aa3.91□□□□□ -1.78
COPS3-205ENST00000463097 ALS2Q96Q42 1657 aa3.9□□□□□ -1.78
COPS3-205ENST00000463097 EVPLLA8MZ36 301 aa3.9□□□□□ -1.79
COPS3-205ENST00000463097 CLDN25C9JDP6 229 aa3.9□□□□□ -1.79
COPS3-205ENST00000463097 PRAMEF26H0Y7S4 382 aa3.9□□□□□ -1.79
COPS3-205ENST00000463097 MANBAO00462 879 aa3.9□□□□□ -1.79
COPS3-205ENST00000463097 CRXO43186 299 aaPredicted RBP3.9□□□□□ -1.79
COPS3-205ENST00000463097 REM1O75628 298 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms