RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 RABL2BQ9UNT1 228 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 A0A1B0GW55 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 K7N7A8 449 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SIRPB1O00241 398 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 CTDSPLO15194 276 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SIGLEC5O15389 551 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L2P0CJ85 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L3P0CJ86 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L4P0CJ87 422 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L5P0CJ88 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L6P0CJ89 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L7P0CJ90 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 GNB3P16520 340 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 TALDO1P37837 337 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 OR3A1P47881 315 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 PDLIM4P50479 330 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 PAX5Q02548 391 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SCN1BQ07699 218 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SPANXN2Q5MJ10 180 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 AVPI1Q5T686 147 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 PYHIN1Q6K0P9 492 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4L9Q6RFH8 374 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DCDC5Q6ZRR9 648 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 PEG10Q86TG7 708 aaKnown RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 GAPTQ8N292 157 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF561Q8N587 486 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 OR4S1Q8NGB4 309 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 S100ZQ8WXG8 99 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 PHF21AQ96BD5 680 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SNX22Q96L94 193 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 SDHCQ99643 169 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
COL6A1-202ENST00000463060 DUX4Q9UBX2 424 aa11.95□□□□□ -0.5
COL6A1-202ENST00000463060 ANKRD17O75179 2603 aaKnown RBP11.94□□□□□ -0.5
COL6A1-202ENST00000463060 SERPINE3A8MV23 424 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 NDUFS8O00217 210 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 SSX5O60225 188 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 CSN2P05814 226 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 WNT2P09544 360 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 PTHLHP12272 177 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 SELLP14151 372 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF44P15621 663 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 GPR6P46095 362 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-202ENST00000463060 GABRA2P47869 451 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 DSCR9P59020 149 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 MADCAM1Q13477 382 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 ARL6IP1Q15041 203 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 KCNJ8Q15842 424 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 PNLIPRP3Q17RR3 467 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 ATAD3CQ5T2N8 411 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 FAM131AQ6UXB0 335 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
COL6A1-202ENST00000463060 FAM216BQ8N7L0 139 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 ZNRF1Q8ND25 227 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 PLPPR1Q8TBJ4 325 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 TIMD4Q96H15 378 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 MED30Q96HR3 178 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 SRRQ9GZT4 340 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
COL6A1-202ENST00000463060 MRPS7Q9Y2R9 242 aaKnown RBP11.94□□□□□ -0.5
COL6A1-202ENST00000463060 UBE2QL1A1L167 161 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 MEIOCA2RUB1 952 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 TMEM235A6NFC5 223 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 CEACAM18A8MTB9 384 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 MCRIP1C9JLW8 97 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
COL6A1-202ENST00000463060 TK1P04183 234 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 CSF3P09919 207 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 IL13RA1P78552 427 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 IL18Q14116 193 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 PAN3Q58A45 887 aaKnown RBP11.93□□□□□ -0.5
COL6A1-202ENST00000463060 NKAPLQ5M9Q1 402 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 Q6ZPA2 131 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 GPX8Q8TED1 209 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 C15orf40Q8WUR7 153 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 FAM168AQ92567 244 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 TSC22D3Q99576 134 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 FAM234AQ9H0X4 552 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
COL6A1-202ENST00000463060 AK3Q9UIJ7 227 aa11.93□□□□□ -0.5
COL6A1-202ENST00000463060 CSMD2Q7Z408 3487 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 TMPRSS2O15393 492 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 ADAM20O43506 726 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 GSTZ1O43708 216 aaPredicted RBP11.92□□□□□ -0.5
COL6A1-202ENST00000463060 NAPSAO96009 420 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 KCNJ3P48549 501 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 PPP5CP53041 499 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 LMO4P61968 165 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 PITPNAQ00169 270 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 RBM39Q14498 530 aaKnown RBP11.92□□□□□ -0.5
COL6A1-202ENST00000463060 CARTPTQ16568 116 aa11.92□□□□□ -0.5
COL6A1-202ENST00000463060 RSBN1Q5VWQ0 802 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms