RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SGCEO43556 437 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 SYNGR3O43761 229 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 CRYBA1P05813 215 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 PATE4P0C8F1 98 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-204ENST00000461897 ZNF32P17041 273 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 LMO1P25800 156 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 CHATP28329 748 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 FOXG1P55316 489 aaPredicted RBP10.72□□□□□ -0.69
COL4A6-204ENST00000461897 TMEM33P57088 247 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 RAB35Q15286 201 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 RXFP4Q8TDU9 374 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 PIGTQ969N2 578 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 MRPL24Q96A35 216 aaKnown RBP10.72□□□□□ -0.69
COL4A6-204ENST00000461897 POM121Q96HA1 1249 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 KIRREL1Q96J84 757 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 SCRT1Q9BWW7 348 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 SUCNR1Q9BXA5 334 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 ESRP2Q9H6T0 727 aaKnown RBP10.72□□□□□ -0.69
COL4A6-204ENST00000461897 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 PLSCR2Q9NRY7 297 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 NECAP2Q9NVZ3 263 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
COL4A6-204ENST00000461897 MED12LQ86YW9 2145 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 AQP7O14520 342 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 PMELP40967 661 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 UCP3P55916 312 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 NRN1LQ496H8 165 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 GPR157Q5UAW9 335 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 Q6ZRG5 221 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 MCEMP1Q8IX19 187 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 ZNF100Q8IYN0 542 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 C15orf54Q8N8G6 183 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 APH1AQ96BI3 265 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 GINS3Q9BRX5 216 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 LIME1Q9H400 295 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 SMCO4Q9NRQ5 59 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 FAM212BQ9NTI7 297 aaPredicted RBP10.71□□□□□ -0.69
COL4A6-204ENST00000461897 CLCF1Q9UBD9 225 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 CACFD1Q9UGQ2 172 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 ZNF391Q9UJN7 358 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 KCNIP3Q9Y2W7 256 aa10.71□□□□□ -0.69
COL4A6-204ENST00000461897 OR6C6A6NF89 314 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 C9JQL5 133 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF587BE7ETH6 402 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 MMP7P09237 267 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 DANCRP0C864 163 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 GABRR1P24046 479 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ACKR3P25106 362 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 MTCP1P56278 107 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 PIGPP57054 158 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 S100A12P80511 92 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ARF1P84077 181 aaKnown RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 PSG4Q00888 419 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 HGFACQ04756 655 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 PEA15Q15121 130 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 CNN3Q15417 329 aaKnown RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 C9orf135Q5VTT2 229 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 Q6ZS92 163 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 SPACA3Q8IXA5 215 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 AKR7LQ8NHP1 331 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 C18orf12Q96KH6 178 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 SULT4A1Q9BR01 284 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 HDHD3Q9BSH5 251 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 OR2H1Q9GZK4 316 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 TUBA4BQ9H853 241 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 AK3Q9UIJ7 227 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 MYO7BQ6PIF6 2116 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ACACAQ13085 2346 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 GPR137BO60478 399 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 FARS2O95363 451 aaKnown RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 MBPP02686 304 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 GLAP06280 429 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 TMEM225BP0DP42 221 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 SPP1P10451 314 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 NFYBP25208 207 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 CD80P33681 288 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 RAB5CP51148 216 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 RNF212Q495C1 297 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 LHFPL2Q6ZUX7 228 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 RBMXL3Q8N7X1 1067 aaKnown RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 OR1F12Q8NHA8 337 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 WNT5BQ9H1J7 359 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 C12orf49Q9H741 205 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 ELL3Q9HB65 397 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-204ENST00000461897 GP6Q9HCN6 339 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 GPR173Q9NS66 373 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 MSRB2Q9Y3D2 182 aa10.7□□□□□ -0.7
COL4A6-204ENST00000461897 IGKV1-27A0A075B6S5 117 aa10.69□□□□□ -0.7
COL4A6-204ENST00000461897 OR8U9P0C7N5 309 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms