RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 BHLHA15Q7RTS1 189 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-205ENST00000461221 SLC16A13Q7RTY0 426 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 SLC35E3Q7Z769 313 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 OR4X1Q8NH49 305 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 PLA2G3Q9NZ20 509 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 IL17BQ9UHF5 180 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 ASB1Q9Y576 335 aa7.97□□□□□ -1.13
BRCA1-205ENST00000461221 CHD2O14647 1828 aaKnown RBP7.97□□□□□ -1.13
BRCA1-205ENST00000461221 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 CDX4O14627 284 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-205ENST00000461221 FAM157CP0CG43 387 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 ZNF25P17030 456 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-205ENST00000461221 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.13
BRCA1-205ENST00000461221 DLK1P80370 383 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 FMODQ06828 376 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 ERASQ7Z444 233 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 ANKRD37Q7Z713 158 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 MRGPRGQ86SM5 289 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 SLC25A42Q86VD7 318 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 NFAM1Q8NET5 270 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-205ENST00000461221 OR10D3Q8NH80 312 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 RSG1Q9BU20 258 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 RSRP1Q9BUV0 290 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.13
BRCA1-205ENST00000461221 PITPNC1Q9UKF7 332 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 CTDSPLO15194 276 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 SYT8Q8NBV8 401 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 CHRNA10Q9GZZ6 450 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 TMEM140Q9NV12 185 aa7.96□□□□□ -1.13
BRCA1-205ENST00000461221 C3orf80F5H4A9 247 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 MYOGP15173 224 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 HTN1P15515 57 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 CARFQ8N187 725 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 LRRC3BQ96PB8 259 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-205ENST00000461221 SHISA8B8ZZ34 492 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 GZMHP20718 246 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 CRYBB2P43320 205 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 FZD5Q13467 585 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 NCMAPQ5T1S8 102 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 BCL7CQ8WUZ0 217 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-205ENST00000461221 POM121Q96HA1 1249 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM204Q9BSN7 226 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 CRISPLD2Q9H0B8 497 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF385DQ9H6B1 395 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF107Q9UII5 783 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-205ENST00000461221 FUT9Q9Y231 359 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 MOB4Q9Y3A3 225 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 AUP1Q9Y679 476 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 ANKRD12Q6UB98 2062 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 A0A1W2PR80 420 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 SNURFLB1AK76 121 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 ZFPL1O95159 310 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 MT-CO3P00414 261 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 SBK3P0C264 359 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 LINC00596Q86U02 117 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 PTP4A1Q93096 173 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 OR2V2Q96R30 315 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 SLIRPQ9GZT3 109 aaKnown RBP7.96□□□□□ -1.14
BRCA1-205ENST00000461221 PIPOXQ9P0Z9 390 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 RABAC1Q9UI14 185 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
BRCA1-205ENST00000461221 J3KRW8 73 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 LYZL6O75951 148 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 VDAC1P21796 283 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 ACER2Q5QJU3 275 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 OR2D3Q8NGH3 330 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 SNX22Q96L94 193 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 LMX1BO60663 402 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 RPL34P49207 117 aaKnown RBP7.95□□□□□ -1.14
BRCA1-205ENST00000461221 RAB9AP51151 201 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 LRRC75BQ2VPJ9 315 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF793Q6ZN11 406 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 FADS6Q8N9I5 356 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 CADM4Q8NFZ8 388 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 ADAT3Q96EY9 351 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-205ENST00000461221 LINC00052Q96N35 136 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 ZNF665Q9H7R5 613 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 PLPP3O14495 311 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 IGLV3-25P01717 112 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 TMEM255AQ5JRV8 349 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 Q6ZNB5 142 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 OR6X1Q8NH79 312 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 PRDM7Q9NQW5 492 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 TNFRSF19Q9NS68 423 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 CITO14578 2027 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 CTXND1A0A1B0GTU2 59 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 SOCS7O14512 581 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 GEMIN2O14893 280 aaKnown RBP7.95□□□□□ -1.14
BRCA1-205ENST00000461221 FABP2P12104 132 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 PMELP40967 661 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 IER3P46695 156 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 CCDC144NLQ6NUI1 221 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 RNF7Q9UBF6 113 aa7.95□□□□□ -1.14
BRCA1-205ENST00000461221 HIGD1AQ9Y241 93 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms