RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ALDH3B2P48448 385 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 PSMA6P60900 246 aaKnown RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 DYNC1I2Q13409 638 aaKnown RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 RPL22L1Q6P5R6 122 aaKnown RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 OR4M1Q8NGD0 313 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 PIGCQ92535 297 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 OPALINQ96PE5 141 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 BRD7Q9NPI1 651 aa13.76□□□□□ -0.21
TOP3A-202ENST00000461127 EPPK1P58107 5090 aaKnown RBP13.76□□□□□ -0.21
TOP3A-202ENST00000461127 TRBV2A0A0J9YWF9 115 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 LCE6AA0A183 80 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 PNMA8CA0A1B0GUJ8 204 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 CST4P01036 141 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 CELP19835 753 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 NKAPLQ5M9Q1 402 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 BCL2L15Q5TBC7 163 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 LIPKQ5VXJ0 399 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 ZDHHC23Q8IYP9 409 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF561Q8N587 486 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 MOB1AQ9H8S9 216 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 PALMDQ9NP74 551 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 RASL12Q9NYN1 266 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 HILPDAQ9Y5L2 63 aa13.75□□□□□ -0.21
TOP3A-202ENST00000461127 RFPL4AA6NLU0 287 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 RFPL4AL1F8VTS6 287 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 CCRL2O00421 344 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 LPLP06858 475 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 CPEP16870 476 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 THBS3P49746 956 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 GPM6AP51674 278 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF121P58317 390 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-202ENST00000461127 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
TOP3A-202ENST00000461127 TPBGQ13641 420 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 ALKBH1Q13686 389 aaKnown RBP13.74□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF273Q14593 569 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 CDK5R1Q15078 307 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 SMIM21Q3B7S5 101 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 FDX2Q6P4F2 183 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 OR2G2Q8NGZ5 317 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 PGAM5Q96HS1 289 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 OR52A1Q9UKL2 312 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 LSM4Q9Y4Z0 139 aaKnown RBP13.74□□□□□ -0.21
TOP3A-202ENST00000461127 RYR2Q92736 4967 aa13.74□□□□□ -0.21
TOP3A-202ENST00000461127 ACOD1A6NK06 481 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 OGG1O15527 345 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 MTRF1O75570 445 aaKnown RBP13.73□□□□□ -0.21
TOP3A-202ENST00000461127 LYL1P12980 280 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 CCR9P51686 369 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 NANOS3P60323 173 aaKnown RBP13.73□□□□□ -0.21
TOP3A-202ENST00000461127 GNG3P63215 75 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 ABCA11PQ4W5N1 156 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 MINOS1Q5TGZ0 78 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 SATL1Q86VE3 508 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF676Q8N7Q3 588 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 OR13F1Q8NGS4 319 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 HPSE2Q8WWQ2 592 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 ASCL2Q99929 193 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 PBOV1Q9GZY1 135 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 COMMD4Q9H0A8 199 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 LIN7BQ9HAP6 207 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 FAM206AQ9NX38 181 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 SIRT4Q9Y6E7 314 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-202ENST00000461127 MINOS1-NBL1R4GNA1 71 aa13.73□□□□□ -0.21
TOP3A-202ENST00000461127 FAM90A22PA8MWA6 464 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 SRSF10O75494 262 aaKnown RBP13.72□□□□□ -0.21
TOP3A-202ENST00000461127 RBP4P02753 201 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 CD36P16671 472 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 ACKR3P25106 362 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 CEBPDP49716 269 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-202ENST00000461127 GPR50Q13585 617 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 LDLRAD2Q5SZI1 272 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 DMKNQ6E0U4 476 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-202ENST00000461127 ACP7Q6ZNF0 438 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 PRSS45Q7RTY3 260 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 PRSS35Q8N3Z0 413 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 CD177Q8N6Q3 437 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 OR5AK2Q8NH90 309 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 FGF23Q9GZV9 251 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-202ENST00000461127 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 NDUFB11Q9NX14 153 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 FRRS1LQ9P0K9 344 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 NUFIP1Q9UHK0 495 aaKnown RBP13.72□□□□□ -0.21
TOP3A-202ENST00000461127 SACSQ9NZJ4 4579 aa13.72□□□□□ -0.21
TOP3A-202ENST00000461127 TMEM212A6NML5 194 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF732B4DXR9 585 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF728P0DKX0 622 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 SLC6A1P30531 599 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 PRDX2P32119 198 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 KIR3DL2P43630 455 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms