RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	OR2W3	Q7Z3T1	314 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM58A	Q8N1B3	248 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	GAPT	Q8N292	157 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	LRRC29	Q8WV35	223 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	RAB1C	Q92928	201 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	SLC25A46	Q96AG3	418 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PERP	Q96FX8	193 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	CEP19	Q96LK0	163 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	CMTM3	Q96MX0	182 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	SPACA5	Q96QH8	159 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TMEM246	Q9BRR3	403 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TM2D1	Q9BX74	207 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	BARHL1	Q9BZE3	327 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	WDR13	Q9H1Z4	485 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	NCOR1P1	Q9H4R4	102 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PATZ1	Q9HBE1	687 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PCDHB16	Q9NRJ7	776 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	UFSP2	Q9NUQ7	469 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	STEAP1	Q9UHE8	339 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	AK6	Q9Y3D8	172 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PPIAL4A	Q9Y536	164 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	DSCAML1	Q8TD84	2053 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	HIVEP2	P31629	2446 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CR1	P17927	2039 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	IGHV3-64D	A0A0J9YX35	117 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	LOC100506127	A0A0U1RQW1	187 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731		A6NLC8	198 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR2AT4	A6NND4	320 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731		A8MXK9	166 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731		H3BMQ9	156 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TRAPPC2L	H3BP13	241 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731		H3BUI4	141 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	WNT9B	O14905	357 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SIGLEC5	O15389	551 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SPRY1	O43609	319 aa	Predicted RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	ANGPTL7	O43827	346 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TPPP	O94811	219 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CDRT1	O95170	752 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CYB5R3	P00387	301 aa	Predicted RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CSN2	P05814	226 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	HCK	P08631	526 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CLEC2L	P0C7M8	214 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TMEM225B	P0DP42	221 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CALCB	P10092	127 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	GTF2F2	P13984	249 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	IRF2	P14316	349 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	BCL3	P20749	454 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	MYL9	P24844	172 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	PRDX2	P32119	198 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TGFBR1	P36897	503 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	RBMX	P38159	391 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	GPR6	P46095	362 aa	Predicted RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	ART1	P52961	327 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CAV3	P56539	151 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	VBP1	P61758	197 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	PAX2	Q02962	417 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	UNC119	Q13432	240 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	IL13RA2	Q14627	380 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	KCNJ8	Q15842	424 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	MICB	Q29980	383 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SMIM21	Q3B7S5	101 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	C2orf76	Q3KRA6	126 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731		Q5PR19	223 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM201A	Q5SY85	155 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SIGIRR	Q6IA17	410 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SFXN4	Q6P4A7	337 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	GLIPR1L1	Q6UWM5	242 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	USP43	Q70EL4	1123 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	PEG10	Q86TG7	708 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	LINC00596	Q86U02	117 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	BIVM	Q86UB2	503 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	MUC20	Q8N307	709 aa	Predicted RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CD177	Q8N6Q3	437 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	PNLDC1	Q8NA58	520 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	CHST4	Q8NCG5	386 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	BEND2	Q8NDZ0	799 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TMEM104	Q8NE00	496 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	WFDC11	Q8NEX6	87 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	KCNG3	Q8TAE7	436 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	DYNC2LI1	Q8TCX1	351 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	NPRL2	Q8WTW4	380 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TNFAIP8L1	Q8WVP5	186 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM3D	Q96BQ1	224 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	ISOC1	Q96CN7	298 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SEH1L	Q96EE3	360 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	TIMD4	Q96H15	378 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	REG4	Q9BYZ8	158 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	BPESC1	Q9GZL8	116 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	NXF2	Q9GZY0	626 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	SHARPIN	Q9H0F6	387 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM234A	Q9H0X4	552 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	METTL9	Q9H1A3	318 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	ABCG5	Q9H222	651 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	DCSTAMP	Q9H295	470 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	EXOSC4	Q9NPD3	245 aa	Known RBP	4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	BATF3	Q9NR55	127 aa		4.67	□□□□□ -1.66
PTPN12-209	ENST00000460731	RBFOX1	Q9NWB1	397 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms