RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 WNT2BQ93097 391 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.793e-7■■■□□ 18.2
NPHP4-204ENST00000460696 COL6A3P12111 3177 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 A0A0G2JMM0 328 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 A0A1W2PPB8 328 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 A0A1W2PRS3 328 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 KIR3DP1A8MWS1 328 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 LINC01387J3KSC0 135 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 ZIC3O60481 467 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 F12P00748 615 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-204ENST00000460696 IFNA1P01562 189 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 SLC25A4P12235 298 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 ENDOGQ14249 297 aaKnown RBP10.12□□□□□ -0.79
NPHP4-204ENST00000460696 TSC22D1Q15714 1073 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PHYHD1Q5SRE7 291 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 OR2M7Q8NG81 312 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF488Q96MN9 340 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 GPHA2Q96T91 129 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 SMCO4Q9NRQ5 59 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 POLDIP2Q9Y2S7 368 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 TRIOO75962 3097 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 TMEM218A2RU14 115 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 UMODP07911 640 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF17P17021 662 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 P2RY4P51582 365 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 ELLP55199 621 aaPredicted RBP10.12□□□□□ -0.79
NPHP4-204ENST00000460696 HIKESHIQ53FT3 197 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 IP6K3Q96PC2 410 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PLK3Q9H4B4 646 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 HEXA-AS1Q9H8Q6 139 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 FOXJ2Q9P0K8 574 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 PURGQ9UJV8 347 aaKnown RBP10.12□□□□□ -0.79
NPHP4-204ENST00000460696 BPTFQ12830 3046 aa10.12□□□□□ -0.79
NPHP4-204ENST00000460696 C3orf85A0A1B0GTC6 90 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF724A8MTY0 619 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 UMAD1C9J7I0 102 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 ADAM20O43506 726 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 ATG12O94817 140 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 BCL3P20749 454 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 LY6DQ14210 128 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 SURF2Q15527 256 aaPredicted RBP10.11□□□□□ -0.79
NPHP4-204ENST00000460696 MSMO1Q15800 293 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 DCAF10Q5QP82 559 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 LCN15Q6UWW0 184 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 C17orf78Q8N4C9 275 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 CLRN3Q8NCR9 226 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 C10orf35Q96D05 121 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 MRPS24Q96EL2 167 aaKnown RBP10.11□□□□□ -0.79
NPHP4-204ENST00000460696 MFNGO00587 321 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 TXNL1O43396 289 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 PPYP01298 95 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 CATR1Q13166 79 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF345Q14585 488 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF766Q5HY98 468 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 THNSL2Q86YJ6 484 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 FAM58AQ8N1B3 248 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 CISD2Q8N5K1 135 aaKnown RBP10.11□□□□□ -0.79
NPHP4-204ENST00000460696 RALYQ9UKM9 306 aaKnown RBP10.11□□□□□ -0.79
NPHP4-204ENST00000460696 KPTNQ9Y664 436 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 MPTX1A8MV57 137 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 DNPH1O43598 174 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 SFTA3P0C7M3 94 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 TLE4Q04727 773 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 CBLN2Q8IUK8 224 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 IMMP1LQ96LU5 166 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 TECTBQ96PL2 329 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 FN3KRPQ9HA64 309 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 FZR1Q9UM11 496 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 STARD10Q9Y365 291 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 TMED3Q9Y3Q3 217 aa10.11□□□□□ -0.79
NPHP4-204ENST00000460696 IGKV1-9A0A0C4DH69 117 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 SH2D1BO14796 132 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 FCGR3AP08637 254 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 HBG1P69891 147 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 HBG2P69892 147 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 TESK1Q15569 626 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 CDCP2Q5VXM1 449 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 OR2A2Q6IF42 318 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 PPP1R32Q7Z5V6 425 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 RTN4RL2Q86UN3 420 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 TMEM123Q8N131 208 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 TCTEX1D2Q8WW35 142 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 MUCL1Q96DR8 90 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 FANCFQ9NPI8 374 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 MMP26Q9NRE1 261 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 ZNF891A8MT65 544 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-204ENST00000460696 ACKR3P25106 362 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 IGSF11Q5DX21 431 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 STPG2Q8N412 459 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 DMBX1Q8NFW5 382 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 OR10AD1Q8NGE0 317 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 SLC26A1Q9H2B4 701 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 NUDT19A8MXV4 375 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 B4E171 279 aa10.1□□□□□ -0.79
NPHP4-204ENST00000460696 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
NPHP4-204ENST00000460696 TSPAN7P41732 249 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms