RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 C20orf24Q9BUV8 137 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR2H1Q9GZK4 316 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 PARP12Q9H0J9 701 aaKnown RBP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR51M1Q9H341 326 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF576Q9H609 170 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 ESRP2Q9H6T0 727 aaKnown RBP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 SEBOXQ9HB31 216 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 CRLF2Q9HC73 371 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 NIT2Q9NQR4 276 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 GFOD1Q9NXC2 390 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 ABI3Q9P2A4 366 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZMAT5Q9UDW3 170 aaKnown RBP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 BOKQ9UMX3 212 aaPredicted RBP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 PUS1Q9Y606 427 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 TMEM56-RWDD3S4R434 201 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 UNC13CQ8NB66 2214 aa2.89□□□□□ -1.95
HMGN1P18-201ENST00000457642 PCNX3Q9H6A9 2034 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CENPFP49454 3210 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FER1L5A0AVI2 2057 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CEP192Q8TEP8 1941 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 IGKV1-27A0A075B6S5 117 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CCDC187A0A096LP49 1063 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 A0A0J9YW62 118 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 A0A1B0GU03 582 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 A0A1B0GV50 99 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 A0A1W2PPE2 198 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 IGSF23A1L1A6 192 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FAM221AA4D161 298 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CLEC18AA5D8T8 446 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 NKX2-6A6NCS4 301 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FAM24AA6NFZ4 105 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CCDC85CA6NKD9 419 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SHISA7A6NL88 538 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ANKRD30BLA7E2S9 258 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF724A8MTY0 619 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SEC14L6B5MCN3 397 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 E9PLN8 166 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 G3V3Y1 287 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 H3BQ15 152 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 HSD17B6O14756 317 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PPP1R2P9O14990 202 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 DEGS1O15121 323 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ADAM20O43506 726 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 GATCO43716 136 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CXCL13O43927 109 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 MRPL33O75394 65 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 TRAPPC6AO75865 159 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 DKK1O94907 266 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 TIAF1O95411 115 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CER1O95813 267 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FBP1P09467 338 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CCL3P10147 92 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 COX5BP10606 129 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 MYF5P13349 255 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CEACAM1P13688 526 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 OMGP23515 440 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ACKR3P25106 362 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 UCP1P25874 307 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 GDF1P27539 372 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 MAS1LP35410 378 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 APLNRP35414 380 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ARR3P36575 388 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PPP1CCP36873 323 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CD200P41217 278 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ID4P47928 161 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 NOVA1P51513 510 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 DYNLT3P51808 116 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 RRADP55042 308 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FOXL2P58012 376 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 OR2B8PP59922 312 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FGF12P61328 243 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 RPS23P62266 143 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 RPS18P62269 152 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 POLR2GP62487 172 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 HLA-DRB3P79483 266 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PSG4Q00888 419 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 NHLH2Q02577 135 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF92Q03936 586 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PLP2Q04941 152 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SPEM2Q0P670 501 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PRDX4Q13162 271 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 COL19A1Q14993 1142 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 HAGHQ16775 308 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 CEACAM16Q2WEN9 425 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 KRTAP27-1Q3LI81 207 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 PHYHD1Q5SRE7 291 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 DNLZQ5SXM8 178 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 TSPO2Q5TGU0 170 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 FIP1L1Q6UN15 594 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 RBMS3Q6XE24 437 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 ZNF574Q6ZN55 896 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SLC25A26Q70HW3 274 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SLC16A13Q7RTY0 426 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 LURAP1LQ8IV03 231 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 MCEMP1Q8IX19 187 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 Q8IYB0 196 aa2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 H1FOOQ8IZA3 346 aaPredicted RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 SELENOHQ8IZQ5 122 aaKnown RBP2.88□□□□□ -1.95
HMGN1P18-201ENST00000457642 GAPTQ8N292 157 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms