RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 AIPO00170 330 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TNFRSF11BO00300 401 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 MFNGO00587 321 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 PPIHO43447 177 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 PRKNO60260 465 aaPredicted RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 HBE1P02100 147 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OPN1SWP03999 348 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CRYBA1P05813 215 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 HPNP05981 417 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CD48P09326 243 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TACSTD2P09758 323 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 PSMB1P20618 241 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 MYL9P24844 172 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 BRS3P32247 399 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 RPA3P35244 121 aaPredicted RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 OR3A2P47893 321 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 GAS1P54826 345 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ERVFC1-1P60608 527 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 SNRPD1P62314 119 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 CAV1Q03135 178 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 FMODQ06828 376 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 IZUMO4Q1ZYL8 232 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 C1orf194Q5T5A4 169 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TPTE2P1Q5T6R2 138 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TEX36Q5VZQ5 186 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 SUMO4Q6EEV6 95 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TNFAIP8L2Q6P589 184 aaPredicted RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 ARL9Q6T311 187 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 UMODL1-AS1Q8N2C9 162 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OSR2Q8N2R0 312 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TCTEX1D1Q8N7M0 179 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OR4M1Q8NGD0 313 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OR4N2Q8NGD1 307 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OR5A2Q8NGI9 324 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ARRDC2Q8TBH0 407 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TMED6Q8WW62 240 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 SLC7A6Q92536 515 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TADA1Q96BN2 335 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ISOC1Q96CN7 298 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 LRRC58Q96CX6 371 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 P2RY11Q96G91 374 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 HYLS1Q96M11 299 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CCDC115Q96NT0 180 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 NEDD4LQ96PU5 975 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ATOH8Q96SQ7 321 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 GFI1Q99684 422 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 RASL11BQ9BPW5 248 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CDC42EP4Q9H3Q1 356 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 C5orf66Q9H5L9 145 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 AAMDCQ9H7C9 122 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 NHEJ1Q9H9Q4 299 aaPredicted RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 EXOSC4Q9NPD3 245 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 KCNJ16Q9NPI9 418 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ACOT13Q9NPJ3 140 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 PLSCR3Q9NRY6 295 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 HRASLS2Q9NWW9 162 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TRMT112Q9UI30 125 aaKnown RBP4.58□□□□□ -1.68
VPS41-209ENST00000457055 MUTYHQ9UIF7 546 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 TNFSF18Q9UNG2 199 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ASF1AQ9Y294 204 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 OR1A2Q9Y585 309 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 ATRXP46100 2492 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CFAP47Q6ZTR5 3102 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 EPG5Q9HCE0 2579 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 CHD8Q9HCK8 2581 aa4.58□□□□□ -1.68
VPS41-209ENST00000457055 RIF1Q5UIP0 2472 aaKnown RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 A0A0J9YY10 115 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 A0A1B0GX78 115 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR5H15A6NDH6 313 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 IDSB3KWA1 339 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 J3KT08 172 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 J3QRK9 145 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 UPK1AO00322 258 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 SH2D1BO14796 132 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 HCRTR1O43613 425 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 C1orf105O95561 183 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 LSM8O95777 96 aaKnown RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 GCGP01275 180 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 HBZP02008 142 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 AMBPP02760 352 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ALPLP05186 524 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 UMODP07911 640 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ADRA2AP08913 450 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ESDP10768 282 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 IGFBP3P17936 291 aaPredicted RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 SRD5A1P18405 259 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 SDC1P18827 310 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 TCN2P20062 427 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 TNFRSF1BP20333 461 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 KDELR1P24390 212 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 NPY1RP25929 384 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 CHRNB4P30926 498 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 GLRXP35754 106 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR1E2P47887 323 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 AMTP48728 403 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 RPL24P83731 157 aaKnown RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 GPR18Q14330 331 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 IAH1Q2TAA2 248 aaPredicted RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 SLC25A35Q3KQZ1 300 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms