RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SLC33A1O00400 549 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-203ENST00000456847 HSPB6O14558 160 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 HTR3BO95264 441 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 LMO1P25800 156 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 BDKRB2P30411 391 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 OR3A4PP47883 348 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 SLC34A1Q06495 639 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 FAM189A2Q15884 450 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 ZNF626Q68DY1 528 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 DMKNQ6E0U4 476 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-203ENST00000456847 Q6P435 159 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 S100A13Q99584 98 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 TMEM138Q9NPI0 162 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 ABCB10Q9NRK6 738 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 CKLFQ9UBR5 152 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 NKX1-2Q9UD57 310 aaPredicted RBP13.16□□□□□ -0.3
CPSF6-203ENST00000456847 ING4Q9UNL4 249 aa13.16□□□□□ -0.3
CPSF6-203ENST00000456847 A0A0G2JK05 382 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 ZNF93P35789 620 aaPredicted RBP13.15□□□□□ -0.3
CPSF6-203ENST00000456847 GLIPR1P48060 266 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 SRSF4Q08170 494 aaKnown RBP13.15□□□□□ -0.3
CPSF6-203ENST00000456847 RIPK1Q13546 671 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 AANATQ16613 207 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 Q499Y3 187 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 PAN3Q58A45 887 aaKnown RBP13.15□□□□□ -0.3
CPSF6-203ENST00000456847 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 PRAMEF5Q5TYX0 476 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 LAIR2Q6ISS4 152 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 NDNFQ8TB73 568 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 ORAI1Q96D31 301 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 TMEM133Q9H2Q1 129 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 PLCXD1Q9NUJ7 323 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 IGHV2-26A0A0B4J1V2 119 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 ALDOBP05062 364 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 CSN2P05814 226 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 WNT4P56705 351 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 ELP2Q6IA86 826 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 FBLIM1Q8WUP2 373 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 CLEC7AQ9BXN2 247 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 RAB18Q9NP72 206 aa13.15□□□□□ -0.3
CPSF6-203ENST00000456847 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 ODAMA1E959 279 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 CSTBP04080 98 aaKnown RBP13.14□□□□□ -0.31
CPSF6-203ENST00000456847 PTGFRP43088 359 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 SSX2Q16385 188 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 PIGYQ3MUY2 71 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF485Q8NCK3 441 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 TFAP2CQ92754 450 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 MALSU1Q96EH3 234 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 COQ2Q96H96 371 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 PGLYRP3Q96LB9 341 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 METTL9Q9H1A3 318 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 C16orf95Q9H693 158 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 TAS2R3Q9NYW6 316 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
CPSF6-203ENST00000456847 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 FAM90A8PA6NJQ4 464 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 CDRT1O95170 752 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 CDK2P24941 298 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-203ENST00000456847 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-203ENST00000456847 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR52W1Q6IF63 320 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 DYNAPQ8N1N2 210 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR4C13Q8NGP0 309 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF184Q99676 751 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-203ENST00000456847 PPIL3Q9H2H8 161 aaKnown RBP13.13□□□□□ -0.31
CPSF6-203ENST00000456847 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 FAM172BPA6NC97 362 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 MMP23AO75900 390 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 TSPAN9O75954 239 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 SERPINA2P20848 420 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 GABRA5P31644 462 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 GLP1RP43220 463 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 AQP4P55087 323 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 MINOS1Q5TGZ0 78 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR4D6Q8NGJ1 314 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR51T1Q8NGJ9 327 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 OR6C3Q9NZP0 311 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 HILPDAQ9Y5L2 63 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 MINOS1-NBL1R4GNA1 71 aa13.13□□□□□ -0.31
CPSF6-203ENST00000456847 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
CPSF6-203ENST00000456847 CELP19835 753 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 PROK1P58294 105 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 HEPN1Q6WQI6 88 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 OSR2Q8N2R0 312 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 CORO2AQ92828 525 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 PAK1IP1Q9NWT1 392 aaPredicted RBP13.12□□□□□ -0.31
CPSF6-203ENST00000456847 SCN3BQ9NY72 215 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
CPSF6-203ENST00000456847 ZNF729A6NN14 1252 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-203ENST00000456847 F2RL2O00254 374 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms