RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 PRDX6P30041 224 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 INSL3P51460 131 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 FUT6P51993 359 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 CDC42P60953 191 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 EBI3Q14213 229 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 SPIN3Q5JUX0 258 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 Q8IYB0 196 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 OR11H1Q8NG94 326 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 CCDC134Q9H6E4 229 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 SIRT4Q9Y6E7 314 aaPredicted RBP13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 RYR1P21817 5038 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 KMT2AQ03164 3969 aa13.38□□□□□ -0.27
UBE2D4-209ENST00000454428 TRIM64CA6NLI5 447 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 J3QR06 171 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 SASH3O75995 380 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 IGHV3-7P01780 117 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 IGHG4P01861 327 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 SPNP16150 400 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 NFYBP25208 207 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 PGAM4Q8N0Y7 254 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 Q8N6K4 173 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 ABCG5Q9H222 651 aa13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 MRM2Q9UI43 246 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-209ENST00000454428 ZNF729A6NN14 1252 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 HMGN1P05114 100 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 PSMB8P28062 276 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 VEGFCP49767 419 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 KIAA0141Q14154 515 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 ODF4Q2M2E3 257 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 TMEM236Q5W0B7 351 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 ZNF322Q6U7Q0 402 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 HDXQ7Z353 690 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 TMEM179BQ7Z7N9 219 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 Q8N9W7 124 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 GIPC3Q8TF64 312 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 ISOC1Q96CN7 298 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 BORCS8Q96FH0 119 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 PPIL3Q9H2H8 161 aaKnown RBP13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 MAGIXQ9H6Y5 334 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 HMG20AQ9NP66 347 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 GLS2Q9UI32 602 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 SNX5Q9Y5X3 404 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 TMEM14AQ9Y6G1 99 aa13.36□□□□□ -0.27
UBE2D4-209ENST00000454428 IGKV1-12A0A0C4DH73 117 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 KBTBD11-OT1A0A1B0GTJ5 212 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 IGKV1D-12P01611 117 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 CSN2P05814 226 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 CXCR4P61073 352 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 FAM27D1Q5T7N8 215 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 FAM53AQ6NSI3 398 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 Q6P435 159 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 OR8H3Q8N146 312 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 EAF1Q96JC9 268 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 HRASLS5Q96KN8 279 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 GNB4Q9HAV0 340 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 EXOSC4Q9NPD3 245 aaKnown RBP13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 ISYNA1Q9NPH2 558 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 PLSCR3Q9NRY6 295 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 LIN7CQ9NUP9 197 aaKnown RBP13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 ING3Q9NXR8 418 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 ACTR3BQ9P1U1 418 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 PSG11Q9UQ72 335 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 GSTK1Q9Y2Q3 226 aa13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 AMMECR1Q9Y4X0 333 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-209ENST00000454428 IGKV1-9A0A0C4DH69 117 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 FUOMA2VDF0 154 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 I3L521 148 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 SH2D1BO14796 132 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 GP9P14770 177 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 POU3F4P49335 361 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 RAB7AP51149 207 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 MADCAM1Q13477 382 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 KRBOX4Q5JUW0 171 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 ZNF429Q86V71 674 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 RBMXL1Q96E39 390 aaKnown RBP13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 GON7Q9BXV9 100 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 COMMD4Q9H0A8 199 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 PLEKHA1Q9HB21 404 aa13.34□□□□□ -0.27
UBE2D4-209ENST00000454428 SLC33A1O00400 549 aaPredicted RBP13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 OSMP13725 252 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 RBP2P50120 134 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 GNB1P62873 340 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 ATXN7L3Q14CW9 347 aaPredicted RBP13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 SSX6Q7RTT6 188 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 BCDIN3DQ7Z5W3 292 aaKnown RBP13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 CNN2Q99439 309 aaKnown RBP13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 LINC00574Q9H8X3 128 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 SLC25A19Q9HC21 320 aa13.33□□□□□ -0.28
UBE2D4-209ENST00000454428 IGHV3-72A0A0B4J1Y9 119 aa13.32□□□□□ -0.28
UBE2D4-209ENST00000454428 NCBP2LA6PVI3 153 aaKnown RBP13.32□□□□□ -0.28
UBE2D4-209ENST00000454428 LDLRAD4O15165 306 aa13.32□□□□□ -0.28
UBE2D4-209ENST00000454428 SYT7O43581 403 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms