RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 LHX4Q969G2 390 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 TBX15Q96SF7 602 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 PPA2Q9H2U2 334 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 PLGRKTQ9HBL7 147 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 SIRT7Q9NRC8 400 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
GTF3C3-206ENST00000448539 SLC33A1O00400 549 aaPredicted RBP11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 HSPB6O14558 160 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 PDCD5O14737 125 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 TCF21O43680 179 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 CRTAPO75718 401 aaPredicted RBP11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 GALP22466 123 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 OR3A1P47881 315 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 PSMD7P51665 324 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 MPV17LQ2QL34 196 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 NCR3LG1Q68D85 454 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 CD200R1LQ6Q8B3 271 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 RBMS3Q6XE24 437 aaKnown RBP11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 TRAPPC6BQ86SZ2 158 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 C22orf15Q8WYQ4 148 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 MRPS24Q96EL2 167 aaKnown RBP11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 CST11Q9H112 138 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 STUB1Q9UNE7 303 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 SSR3Q9UNL2 185 aa11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 AK6Q9Y3D8 172 aaKnown RBP11.53□□□□□ -0.56
GTF3C3-206ENST00000448539 A0A1W2PP11 408 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 GEMIN2O14893 280 aaKnown RBP11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 CSN2P05814 226 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 HTR2CP28335 458 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 ERP29P30040 261 aaKnown RBP11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 P2RX3P56373 397 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF273Q14593 569 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 KRBOX4Q5JUW0 171 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 C1orf100Q5SVJ3 147 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 ATAD3CQ5T2N8 411 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 C22orf42Q6IC83 251 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 LYPD6Q86Y78 171 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 PDZD9Q8IXQ8 264 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 Q8N7P7 452 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 TPRX1Q8N7U7 411 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 OR6M1Q8NGM8 313 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 SLC6A7Q99884 636 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 BARHL1Q9BZE3 327 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 BANF2Q9H503 90 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF696Q9H7X3 374 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 ING3Q9NXR8 418 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 V9GY05 133 aa11.52□□□□□ -0.57
GTF3C3-206ENST00000448539 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 A0A0A6YYJ9 748 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 TRAV1-2A0A0B4J238 106 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 TRAV24A0A0B4J272 114 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 H3BUI4 141 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF728P0DKX0 622 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 MGMTP16455 207 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 CCL3L1P16619 93 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 PRTN3P24158 256 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 KCNJ3P48549 501 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 AESQ08117 197 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 ATXN7L3Q14CW9 347 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 RAB11BQ15907 218 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 TAF9Q16594 264 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 RUSC1-AS1Q66K80 236 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 NEK7Q8TDX7 302 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF714Q96N38 554 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 JMJD8Q96S16 334 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 DPCDQ9BVM2 203 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 SELENOIQ9C0D9 397 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 IFT22Q9H7X7 185 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 HEXA-AS1Q9H8Q6 139 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 LINC00312Q9Y6C7 94 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 SVEP1Q4LDE5 3571 aa11.51□□□□□ -0.57
GTF3C3-206ENST00000448539 MEX3AA1L020 520 aaKnown RBP11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A10PA6NDY2 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A18PA6NE21 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A16PA6NEW6 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A20PA6NIJ5 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A8PA6NJQ4 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A7PA6NKC0 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A22PA8MWA6 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A12PA8MX19 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A5PA8MXJ8 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A23PA8MXZ1 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 SLC17A2O00624 439 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 SLC22A1O15245 554 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 BPNT1O95861 308 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 MPIG6BO95866 241 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A15PP0C7V4 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A13PP0C7W8 464 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms