RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 P2RX3P56373 397 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 LGALS4P56470 323 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 RPL15P61313 204 aaKnown RBP10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 RSU1Q15404 277 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 DDI2Q5TDH0 399 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 RNLSQ5VYX0 342 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 OR51T1Q8NGJ9 327 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 SGCDQ92629 289 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 OR14A2Q96R54 314 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 SSX3Q99909 188 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 FAM192AQ9GZU8 254 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 PAK1IP1Q9NWT1 392 aaPredicted RBP10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 VPREB3Q9UKI3 123 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 ING4Q9UNL4 249 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 ERGIC3Q9Y282 383 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 MMP24Q9Y5R2 645 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
PRPF40A-203ENST00000448428 FUOMA2VDF0 154 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 MAGEA13PA6NCF6 341 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 BTBD17A6NE02 478 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 FAM90A8PA6NJQ4 464 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 MMP23AO75900 390 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 HTR3BO95264 441 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 ARG1P05089 322 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 MYF6P23409 242 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 RIPK1Q13546 671 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 LDLRAD2Q5SZI1 272 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 GDPGP1Q6ZNW5 385 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 LHFPL4Q7Z7J7 247 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 TRAPPC6BQ86SZ2 158 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 CHST4Q8NCG5 386 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 OR11H6Q8NGC7 330 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 OR5R1Q8NH85 324 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 CORO2AQ92828 525 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 MYDGFQ969H8 173 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 COQ2Q96H96 371 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 ZNF184Q99676 751 aaPredicted RBP10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 CDCA4Q9BXL8 241 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 BEX1Q9HBH7 125 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 ING3Q9NXR8 418 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 SCN3BQ9NY72 215 aa10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 UBE2J1Q9Y385 318 aaPredicted RBP10.34□□□□□ -0.75
PRPF40A-203ENST00000448428 TRGV10A0A0A0MS01 117 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 TRAV24A0A0B4J272 114 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 A0A1B0GUS0 222 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 ODF3BA8MYP8 253 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 H3BUX3 64 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 PIN1P1O15428 100 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 CSN2P05814 226 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 SLC35A2P78381 396 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 LRRC75BQ2VPJ9 315 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 PIGYQ3MUY2 71 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 KRBOX4Q5JUW0 171 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 ZNF626Q68DY1 528 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 DERL3Q96Q80 235 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 OR5M11Q96RB7 305 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 MND1Q9BWT6 205 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 ANKRD60Q9BZ19 345 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 METTL9Q9H1A3 318 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 PPIL3Q9H2H8 161 aaKnown RBP10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 DUSP21Q9H596 190 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 IL36GQ9NZH8 169 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 CKLFQ9UBR5 152 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 LSM2Q9Y333 95 aaKnown RBP10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 SESN1Q9Y6P5 492 aa10.33□□□□□ -0.76
PRPF40A-203ENST00000448428 ODAMA1E959 279 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 CLPSL1A2RUU4 121 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 H0YHG0 523 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 HSPB6O14558 160 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 CLPXO76031 633 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 CSTBP04080 98 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 FSTP19883 344 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 BDH1Q02338 343 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 DYNC1I2Q13409 638 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 IL13RA2Q14627 380 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 IRF3Q14653 427 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 ATXN7L3Q14CW9 347 aaPredicted RBP10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 SPHARQ15513 63 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 LY6EQ16553 131 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 AANATQ16613 207 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 PAN3Q58A45 887 aaKnown RBP10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 OLFML2AQ68BL7 652 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 UNQ9370/PRO34162Q6UXP9 181 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 IZUMO2Q6UXV1 221 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 BAIAP2L2Q6UXY1 529 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 Q6ZSV7 163 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 OSR2Q8N2R0 312 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 PIFOQ8TCI5 191 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 MALSU1Q96EH3 234 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 S100A13Q99584 98 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 SLITRK2Q9H156 845 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 TMEM133Q9H2Q1 129 aa10.32□□□□□ -0.76
PRPF40A-203ENST00000448428 TAS2R3Q9NYW6 316 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms