RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ELF5Q9UKW6 265 aaPredicted RBP16.33■□□□□ 0.2
SGCE-207ENST00000447873 CTDSPLO15194 276 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 FSTL3O95633 263 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 GLAP06280 429 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 MELTFP08582 738 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 PAX1P15863 534 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 GNG2P59768 71 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
SGCE-207ENST00000447873 RNASE12Q5GAN4 147 aaKnown RBP16.32■□□□□ 0.2
SGCE-207ENST00000447873 AVPI1Q5T686 147 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 ZNF525Q8N782 197 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 PERPQ96FX8 193 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 CCL13Q99616 98 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 ZNF665Q9H7R5 613 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 AK3Q9UIJ7 227 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 METRNQ9UJH8 293 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 POLQO75417 2590 aa16.32■□□□□ 0.2
SGCE-207ENST00000447873 HECTD1Q9ULT8 2610 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 MEIOCA2RUB1 952 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 NKX6-3A6NJ46 265 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 NDUFA2O43678 99 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 PSPNO60542 156 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 IGHV2-70P01814 119 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 DNASE1P24855 282 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 MRPS15P82914 257 aaKnown RBP16.31■□□□□ 0.2
SGCE-207ENST00000447873 ATPAF1Q5TC12 328 aaPredicted RBP16.31■□□□□ 0.2
SGCE-207ENST00000447873 MUC20Q8N307 709 aaPredicted RBP16.31■□□□□ 0.2
SGCE-207ENST00000447873 ZNF561Q8N587 486 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 FCAMRQ8WWV6 532 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 SDSLQ96GA7 329 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 TMEM246Q9BRR3 403 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 GSX2Q9BZM3 304 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 CHST6Q9GZX3 395 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 DNTTIP1Q9H147 329 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 PPA2Q9H2U2 334 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 SCPEP1Q9HB40 452 aa16.31■□□□□ 0.2
SGCE-207ENST00000447873 TMEM82A0PJX8 343 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 GABARAPH6UMI1 98 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 TMPRSS2O15393 492 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 CD3GP09693 182 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 AMY2BP19961 511 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 GPR6P46095 362 aaPredicted RBP16.3■□□□□ 0.2
SGCE-207ENST00000447873 DGCR2P98153 550 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 GUCA2AQ02747 115 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 ZNF788Q6ZQV5 615 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 ZNRF1Q8ND25 227 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 SMIM4Q8WVI0 70 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 NUDCD2Q8WVJ2 157 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 DYRK2Q92630 601 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 GAFA1Q96PS6 74 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 SDHCQ99643 169 aaPredicted RBP16.3■□□□□ 0.2
SGCE-207ENST00000447873 ETAA1Q9NY74 926 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 MAB21L2Q9Y586 359 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 SULT1C2O00338 296 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 ZNF737O75373 536 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 CA11O75493 328 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 LPLP06858 475 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 PDLIM4P50479 330 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 IL13RA1P78552 427 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 ATXN7L3Q14CW9 347 aaPredicted RBP16.3■□□□□ 0.2
SGCE-207ENST00000447873 C17orf107Q6ZR85 190 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 SLC36A1Q7Z2H8 476 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 OR8H2Q8N162 312 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 FAM216BQ8N7L0 139 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 OR52I2Q8NH67 350 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 SNX22Q96L94 193 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 CMSS1Q9BQ75 279 aaKnown RBP16.3■□□□□ 0.2
SGCE-207ENST00000447873 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
SGCE-207ENST00000447873 UNC79Q9P2D8 2635 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 SIGLEC5O15389 551 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 ADAM20O43506 726 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 GSTZ1O43708 216 aaPredicted RBP16.29■□□□□ 0.2
SGCE-207ENST00000447873 OR3A1P47881 315 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 GRK1Q15835 563 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 DCDC5Q6ZRR9 648 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 TRAPPC6BQ86SZ2 158 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 TMEM185AQ8NFB2 350 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 OR4S1Q8NGB4 309 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 GPX8Q8TED1 209 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 MED30Q96HR3 178 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 THAP7Q9BT49 309 aaPredicted RBP16.29■□□□□ 0.2
SGCE-207ENST00000447873 SHARPINQ9H0F6 387 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 BEX4Q9NWD9 120 aaPredicted RBP16.29■□□□□ 0.2
SGCE-207ENST00000447873 ING3Q9NXR8 418 aa16.29■□□□□ 0.2
SGCE-207ENST00000447873 MEIS3P1A6NDR6 274 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 K7N7A8 449 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 TNFRSF13BO14836 293 aaPredicted RBP16.28■□□□□ 0.2
SGCE-207ENST00000447873 KCNJ3P48549 501 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 BAK1Q16611 211 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 TMEM155Q4W5P6 130 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 SHEQ5VZ18 495 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 BORCS5Q969J3 196 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 HDHD3Q9BSH5 251 aaPredicted RBP16.28■□□□□ 0.2
SGCE-207ENST00000447873 FAM234AQ9H0X4 552 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 C12orf4Q9NQ89 552 aa16.28■□□□□ 0.2
SGCE-207ENST00000447873 A0A1B0GW55 424 aa16.27■□□□□ 0.2
SGCE-207ENST00000447873 SSX5O60225 188 aa16.27■□□□□ 0.2
SGCE-207ENST00000447873 RBBP9O75884 186 aa16.27■□□□□ 0.2
SGCE-207ENST00000447873 TK1P04183 234 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms