RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RNF122Q9H9V4 155 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 ZMAT5Q9UDW3 170 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NXPH3O95157 252 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CTSDP07339 412 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CBR1P16152 277 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 SLC38A11Q08AI6 406 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RNF212Q495C1 297 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 SCARF2Q96GP6 870 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM204Q9BSN7 226 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RCL1Q9Y2P8 373 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 DNAJC13O75165 2243 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 G3V3Q6 166 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 WNT9BO14905 357 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 BCL2L11O43521 198 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 MMP16P51512 607 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 HLA-DRB3P79483 266 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 LIAT1Q6ZQX7 453 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 NEU4Q8WWR8 484 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 WDFY2Q96P53 400 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM272A0A1B0GTI8 110 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 K7N7A8 449 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CST4P01036 141 aa7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CDKN2AP42771 156 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CXorf67Q86X51 503 aaPredicted RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 TECRQ9NZ01 308 aaKnown RBP7.52□□□□□ -1.21
PTPN3-204ENST00000446349 CEP290O15078 2479 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SHISA8B8ZZ34 492 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SFT2D2O95562 160 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 GABRB1P18505 474 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 KIR3DL2P43630 455 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 AMTP48728 403 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 RPL31P62899 125 aaKnown RBP7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FMODQ06828 376 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FAM209BQ5JX69 171 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 RNFT1Q5M7Z0 435 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PDPNQ86YL7 162 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 KLHDC1Q8N7A1 406 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 UBE2FQ969M7 185 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ZNF714Q96N38 554 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 POMT1Q9Y6A1 747 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 UBE2L5PA0A1B0GUS4 154 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 MGST3O14880 152 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 OGG1O15527 345 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SPINT1O43278 529 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 TNXAQ16473 311 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FFAR4Q5NUL3 377 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FNDC7Q5VTL7 733 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 HSD17B13Q7Z5P4 300 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM251Q8N6I4 163 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 WDR31Q8NA23 367 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-204ENST00000446349 C20orf24Q9BUV8 137 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SH3BGRL3Q9H299 93 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PTHLHP12272 177 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 OR3A1P47881 315 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ETFDHQ16134 617 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SIGLECL1Q8N7X8 197 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 RPS4Y2Q8TD47 263 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PI4KAP42356 2102 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ADAM11O75078 769 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 NDUFB6O95139 128 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ZFPL1O95159 310 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 CD160O95971 181 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 GALR1P47211 349 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ATP5IP56385 69 aaPredicted RBP7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SAMD13Q5VXD3 122 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FA2HQ7L5A8 372 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 RNF133Q8WVZ7 376 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 A0A1W2PNV4 684 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FAM221AA4D161 298 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PATE3B3GLJ2 98 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SLC25A5P05141 298 aaKnown RBP7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SPCS3P61009 180 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 MIDNQ504T8 468 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 WDR73Q6P4I2 378 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 GPR137Q96N19 417 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PRR19A6NJB7 356 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 NME2P1O60361 137 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 IGHA2P01877 340 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 ERVFC1-1P60608 527 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SLC16A12Q6ZSM3 486 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 C9orf40Q8IXQ3 194 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SAXO1Q8IYX7 474 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 BATF2Q8N1L9 274 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PHYHIPLQ96FC7 376 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 SLC52A3Q9NQ40 469 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 AREGP15514 252 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 MRGPRDQ8TDS7 321 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 PPP1R1CQ8WVI7 109 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 R3HDM4Q96D70 268 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 CCL19Q99731 98 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 FZR1Q9UM11 496 aa7.51□□□□□ -1.21
PTPN3-204ENST00000446349 DLL1O00548 723 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 BGLAPP02818 100 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 FAM3AP98173 230 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ZNF66Q6ZN08 573 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms