RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ABHD14AQ9BUJ0 271 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 UBE2ZQ9H832 354 aaPredicted RBP10.31□□□□□ -0.76
MSH6-204ENST00000445503 PLEKHF2Q9H8W4 249 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CCL28Q9NRJ3 127 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 OR14J1Q9UGF5 321 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CACFD1Q9UGQ2 172 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 WSB1Q9Y6I7 421 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 A0A087WZY1 265 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 RBFOX3A6NFN3 312 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CEBPZOSA8MTT3 80 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 LIFP15018 202 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 IL13RA2Q14627 380 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 LHFPL1Q86WI0 220 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 SPEM1Q8N4L4 309 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 UBAC2Q8NBM4 344 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CHRNA10Q9GZZ6 450 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 C12orf49Q9H741 205 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 FBLN5Q9UBX5 448 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 SIT1Q9Y3P8 196 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CEP250Q9BV73 2442 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 ANKRD30BLA7E2S9 258 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 CHST1O43916 411 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
MSH6-204ENST00000445503 ZNF528Q3MIS6 628 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 C9orf152Q5JTZ5 239 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 SPANXN5Q5MJ07 72 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 MARS2Q96GW9 593 aaKnown RBP10.31□□□□□ -0.76
MSH6-204ENST00000445503 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 TGIF2Q9GZN2 237 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 PISDQ9UG56 409 aa10.31□□□□□ -0.76
MSH6-204ENST00000445503 NCOA6Q14686 2063 aaPredicted RBP10.31□□□□□ -0.76
MSH6-204ENST00000445503 A0A1W2PR80 420 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 ACAA1P09110 424 aaPredicted RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 PSG4Q00888 419 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 HABP2Q14520 560 aaPredicted RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 TMEM187Q14656 261 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 COL19A1Q14993 1142 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 SRXN1Q9BYN0 137 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 STARD10Q9Y365 291 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 POMT1Q9Y6A1 747 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 COLCA2A8K830 154 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 EIF2S3P41091 472 aaKnown RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 ZNF488Q96MN9 340 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 TOLLIPQ9H0E2 274 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 WFDC1Q9HC57 220 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 PNRC2Q9NPJ4 139 aaKnown RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 LINC00587B1AMM8 73 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 H0YL77 283 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 AP4M1O00189 453 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 NDUFA2O43678 99 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 SCTP09683 121 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 MDKP21741 143 aaPredicted RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 EPHA8P29322 1005 aaPredicted RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 ARF1P84077 181 aaKnown RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 FAM89BQ8N5H3 189 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 INTS12Q96CB8 462 aaKnown RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 RBMXL1Q96E39 390 aaKnown RBP10.3□□□□□ -0.76
MSH6-204ENST00000445503 PRUNE2Q8WUY3 3088 aa10.3□□□□□ -0.76
MSH6-204ENST00000445503 MUC22E2RYF6 1773 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 H3BQ15 152 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 PPP1R2P9O14990 202 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 BCL3P20749 454 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ADIRFQ15847 76 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 RNF212Q495C1 297 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 FAM27BQ5VT28 67 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 OR10D4PQ8NGN7 298 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 OR10J5Q8NHC4 309 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ERRFI1Q9UJM3 462 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 CHCHD2Q9Y6H1 151 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 A0A1W2PPE3 182 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 CLDN1O95832 211 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 DANCRP0C864 163 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 CYB561P49447 251 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 LTC4SQ16873 150 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ABHD17BQ5VST6 288 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 C17orf82Q86X59 251 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 GPR27Q9NS67 375 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 PTPRSQ13332 1948 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 METTL15P1P0C7V9 234 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 DTYMKP23919 212 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 RAC3P60763 192 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 COTL1Q14019 142 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ZNF343Q6P1L6 599 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 OR2V1Q8NHB1 315 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ZNF251Q9BRH9 671 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 TMEM38BQ9NVV0 291 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 TPRP12270 2363 aaKnown RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 SIRPB1O00241 398 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 IDH3GP51553 393 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 RAB1AP62820 205 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 PRDX4Q13162 271 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 MPV17LQ2QL34 196 aa10.29□□□□□ -0.76
MSH6-204ENST00000445503 ZNF468Q5VIY5 522 aaPredicted RBP10.29□□□□□ -0.76
MSH6-204ENST00000445503 LILRB1Q8NHL6 650 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms