RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CXCR6O00574 342 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 MITFO75030 526 aaPredicted RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 NDUFA3O95167 84 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 MT-ND1P03886 318 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 FUT1P19526 365 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 MPZP25189 248 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 BLVRBP30043 206 aaPredicted RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 EDDM3BP56851 147 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 RGS8P57771 180 aaPredicted RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 GTDC1Q4AE62 458 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 ZNF573Q86YE8 665 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 OR2AJ1Q8NGZ0 328 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 SGK3Q96BR1 496 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 RNF170Q96K19 258 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 PAPOLGQ9BWT3 736 aaKnown RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 TNFRSF12AQ9NP84 129 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 PNRC2Q9NPJ4 139 aaKnown RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 G3V318 75 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 SBK3P0C264 359 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 CLUP10909 449 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 FOLR2P14207 255 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 EPHA2P29317 976 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 DSTNP60981 165 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 TAF13Q15543 124 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 ACOT6Q3I5F7 207 aaPredicted RBP4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 ZNF767PQ75MW2 155 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 CTAGE3PQ8IX95 158 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 TMEM104Q8NE00 496 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 OR8B12Q8NGG6 310 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 KCNA7Q96RP8 456 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 PKIBQ9C010 78 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 LACRTQ9GZZ8 138 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 TMEM38AQ9H6F2 299 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 GTF2A1LQ9UNN4 478 aa4.44□□□□□ -1.7
BRAFP1-201ENST00000445336 A0A087WTM6 91 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 OR4C46A6NHA9 309 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SMIM23A6NLE4 172 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 LRRN3E7EW58 273 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 XKRYO14609 159 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 TSPAN4O14817 238 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 TRIM13O60858 407 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 B3GALNT1O75752 331 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 TRGV3P03979 118 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CSN2P05814 226 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 AQP2P41181 271 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 PRDX4Q13162 271 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CEACAM21Q3KPI0 293 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 KLHL12Q53G59 568 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 GPHB5Q86YW7 130 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 POC5Q8NA72 575 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 PBKQ96KB5 322 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CNN2Q99439 309 aaKnown RBP4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 KCNJ15Q99712 375 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CNOT2Q9NZN8 540 aaKnown RBP4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SLC7A11Q9UPY5 501 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 F5H5K5 113 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 K7EP13 123 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SOX15O60248 233 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CDK2P24941 298 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 ERVK11-1P61568 191 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 FADDQ13158 208 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 MSANTD1Q6ZTZ1 278 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SLC16A9Q7RTY1 509 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 ANKMY2Q8IV38 441 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 Q8IYB0 196 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 CLECL1Q8IZS7 167 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SLC38A5Q8WUX1 472 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 SLC2A9Q9NRM0 540 aa4.43□□□□□ -1.7
BRAFP1-201ENST00000445336 AZIN1O14977 448 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 PIPP12273 146 aaPredicted RBP4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 GRB2P62993 217 aaKnown RBP4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 HNF4GQ14541 408 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 C5orf64Q2M2E5 130 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 ACTBL2Q562R1 376 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 PRAMEF5Q5TYX0 476 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 KANK2Q63ZY3 851 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 HMGN2P46Q86SG4 172 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 TMEM61Q8N0U2 210 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 OR6V1Q8N148 313 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 ARL6IP6Q8N6S5 226 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 RNF148Q8N7C7 305 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 BVESQ8NE79 360 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 OR52M1Q8NGK5 317 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 CD300LFQ8TDQ1 290 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 NEU1Q99519 415 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 C5orf66Q9H5L9 145 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 IFNKQ9P0W0 207 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 MRPS14O60783 128 aaKnown RBP4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 TROVE2P10155 538 aaKnown RBP eCLIP4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 PYCR1P32322 319 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 PAX5Q02548 391 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 CDK5R1Q15078 307 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 ZNF773Q6PK81 442 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 MOB3BQ86TA1 216 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms