RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ABCA11PQ4W5N1 156 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 LINC00596Q86U02 117 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 OR1J1Q8NGS3 322 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 SNIP1Q8TAD8 396 aaKnown RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 SLC25A40Q8TBP6 338 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
RBM39-216ENST00000444878 RTL8AQ9BWD3 113 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 OR51I2Q9H344 312 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 PLSCR4Q9NRQ2 329 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 C1orf123Q9NWV4 160 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 DKK4Q9UBT3 224 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 ACACAQ13085 2346 aa11.69□□□□□ -0.54
RBM39-216ENST00000444878 TUBAL3A6NHL2 446 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 CRYM-AS1A6NIL9 109 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 SPDEFO95238 335 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 HOXB5P09067 269 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 ESCO2Q56NI9 601 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 Q6ZS92 163 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 FAM58AQ8N1B3 248 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 SCARB1Q8WTV0 552 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 SPACA1Q9HBV2 294 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 PROCRQ9UNN8 238 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 MPTX1A8MV57 137 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 J3QT63 122 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 AGFG2O95081 481 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 BEX5Q5H9J7 111 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 OR5T2Q8NGG2 359 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 OR10C1Q96KK4 312 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 KCNIP3Q9Y2W7 256 aa11.68□□□□□ -0.54
RBM39-216ENST00000444878 WDR1O75083 606 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 RHBDL1O75783 438 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 TNFSF13O75888 250 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 NAPSAO96009 420 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 HERV-K104P61576 105 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 IL13RA2Q14627 380 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 Q6ZS49 121 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 CXorf67Q86X51 503 aaPredicted RBP11.67□□□□□ -0.54
RBM39-216ENST00000444878 LINC00469Q8N7U9 141 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 ZNF610Q8N9Z0 462 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 MOB3AQ96BX8 217 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 PIK3IP1Q96FE7 263 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 Q9N2K0 584 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
RBM39-216ENST00000444878 APC2O95996 2303 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 LRP5LA4QPB2 252 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 BCL2L11O43521 198 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 PDGFAP04085 211 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 UBA52P62987 128 aaKnown RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 PSG7Q13046 419 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 IGFBP7Q16270 282 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SRSF7Q16629 238 aaKnown RBP eCLIP11.66□□□□□ -0.545e-7■■■□□ 16.7
RBM39-216ENST00000444878 IGSF11Q5DX21 431 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 UNQ6126/PRO20091Q6UXV3 157 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 ASCL5Q7RTU5 278 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 COMMD7Q86VX2 200 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SLC38A6Q8IZM9 456 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 C17orf78Q8N4C9 275 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SUMF2Q8NBJ7 301 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 STARD4Q96DR4 205 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 OPN3Q9H1Y3 402 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 AUP1Q9Y679 476 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 MBD3L4A6NDZ8 208 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 MBD3L3A6NE82 208 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 MBD3L5A6NJ08 208 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 HS3ST1O14792 307 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SELEP16581 610 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 AADACP22760 399 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 UCP3P55916 312 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 PHLDA2Q53GA4 152 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 FAM76BQ5HYJ3 339 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 MBD3L2Q8NHZ7 208 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 KLF14Q8TD94 323 aaPredicted RBP11.66□□□□□ -0.54
RBM39-216ENST00000444878 ST8SIA2Q92186 375 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SYT3Q9BQG1 590 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 RHOFQ9HBH0 211 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 SLC2A9Q9NRM0 540 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 POLDIP2Q9Y2S7 368 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 MEMO1Q9Y316 297 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 ZGRF1Q86YA3 2104 aa11.66□□□□□ -0.54
RBM39-216ENST00000444878 KIAA2026Q5HYC2 2103 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 TRBV6-7A0A0A0MS04 114 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 SLC34A2O95436 690 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 PPYP01298 95 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 TK1P04183 234 aa11.65□□□□□ -0.54
RBM39-216ENST00000444878 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms