RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RNF212BA8MTL3 300 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 SLC33A1O00400 549 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 VENTXO95231 258 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 GTF2F2P13984 249 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 ERP29P30040 261 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 GP2P55259 537 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 P2RX3P56373 397 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 RBM11P57052 281 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 SRSF2Q01130 221 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 UBE2UQ5VVX9 321 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 PPA2Q9H2U2 334 aa14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 UNKLQ9H9P5 680 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 FBN1P35555 2871 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-209ENST00000444508 RNASEK-C17orf49H0YIS7 233 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 CSN2P05814 226 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZNF728P0DKX0 622 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 CCL3L1P16619 93 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 PSMB9P28065 219 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 KCTD21Q4G0X4 260 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 PAN3Q58A45 887 aaKnown RBP14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 NHLRC3Q5JS37 347 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 TMEM91Q6ZNR0 172 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 TRAPPC6BQ86SZ2 158 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 LINC00596Q86U02 117 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 LRRTM1Q86UE6 522 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 TPRX1Q8N7U7 411 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 OR4D6Q8NGJ1 314 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZDHHC16Q969W1 377 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 PPIL3Q9H2H8 161 aaKnown RBP14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 NDUFB11Q9NX14 153 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 SF3B6Q9Y3B4 125 aaKnown RBP14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 LINC00312Q9Y6C7 94 aa14.31□□□□□ -0.12
SMARCAL1-209ENST00000444508 MEX3AA1L020 520 aaKnown RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 OR7C1O76099 320 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 CALRP27797 417 aaKnown RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 UBE2E1P51965 193 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 DLX1P56177 255 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 ERVFRD-1P60508 538 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 FABP5Q01469 135 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 PRB3Q04118 309 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 BAMBIQ13145 260 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 KLRD1Q13241 179 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 ATXN7L3Q14CW9 347 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 SSX1Q16384 188 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 LYPD6Q86Y78 171 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 TNFRSF14Q92956 283 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 MRPS24Q96EL2 167 aaKnown RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZNF714Q96N38 554 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 HEXA-AS1Q9H8Q6 139 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 GHRLQ9UBU3 117 aa14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 SOX21Q9Y651 276 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-209ENST00000444508 DSCAML1Q8TD84 2053 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 TRGV10A0A0A0MS01 117 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 TRAV24A0A0B4J272 114 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 C17orf98A8MV24 154 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 CCRL2O00421 344 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 HSPB6O14558 160 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 GEMIN2O14893 280 aaKnown RBP14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 CRTAPO75718 401 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 RBP4P02753 201 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 UBBP0CG47 229 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 AESQ08117 197 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 MPV17LQ2QL34 196 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 TUSC1Q2TAM9 212 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 DEFB112Q30KQ8 113 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 KRBOX4Q5JUW0 171 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZNF48Q96MX3 618 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 IFT22Q9H7X7 185 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 ING3Q9NXR8 418 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 UBE2J1Q9Y385 318 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 FAM96BQ9Y3D0 163 aa14.29□□□□□ -0.12
SMARCAL1-209ENST00000444508 A0A1W2PP11 408 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 A0A1W2PRD5 423 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 A0A1W2PRF3 423 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 A0A1W2PRM7 423 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 ODAMA1E959 279 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 NPFFO15130 113 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 GLIPR1P48060 266 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 KCNJ3P48549 501 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 DLX6P56179 175 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 KRTAP24-1Q3LI83 254 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 C1orf100Q5SVJ3 147 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 ATAD3CQ5T2N8 411 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZNF782Q6ZMW2 699 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 SUMF2Q8NBJ7 301 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZFAND2BQ8WV99 257 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 MDFIQ99750 246 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 BARHL1Q9BZE3 327 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 CST11Q9H112 138 aa14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 ZMAT3Q9HA38 289 aaKnown RBP14.28□□□□□ -0.12
SMARCAL1-209ENST00000444508 A0A0U1RQK1 487 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 MDFIC2A0A1B0GVS7 189 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 MGMTP16455 207 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 HTR2CP28335 458 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 TAF9Q16594 264 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 TCF23Q7RTU1 214 aa14.27□□□□□ -0.13
SMARCAL1-209ENST00000444508 PIP4P2Q8N4L2 257 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms