RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 UNKLQ9H9P5 680 aaKnown RBP8.92□□□□□ -0.98
HDAC6-211ENST00000443563 C19orf12Q9NSK7 152 aa8.92□□□□□ -0.98
HDAC6-211ENST00000443563 ST3GAL6Q9Y274 331 aa8.92□□□□□ -0.98
HDAC6-211ENST00000443563 TRDV1A0A1B0GX56 115 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 SLC33A1O00400 549 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-211ENST00000443563 PDCD5O14737 125 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 PSPNO60542 156 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 RBP4P02753 201 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 IGHV4-38-2P0DP08 117 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 PRTN3P24158 256 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 MYL9P24844 172 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 OR3A1P47881 315 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 GP2P55259 537 aaKnown RBP8.91□□□□□ -0.98
HDAC6-211ENST00000443563 EDDM3AQ14507 147 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 PIGYQ3MUY2 71 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 C1orf100Q5SVJ3 147 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 TMEM200BQ69YZ2 307 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 LYPD6Q86Y78 171 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 TSPAN14Q8NG11 270 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 OR4S1Q8NGB4 309 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 OR4M1Q8NGD0 313 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 OR4D6Q8NGJ1 314 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 OR6M1Q8NGM8 313 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 LHX4Q969G2 390 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 BARHL1Q9BZE3 327 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 SPACA1Q9HBV2 294 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 ZNF69Q9UC07 566 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 LINC00312Q9Y6C7 94 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 DSCAML1Q8TD84 2053 aa8.91□□□□□ -0.98
HDAC6-211ENST00000443563 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
HDAC6-211ENST00000443563 TRGV10A0A0A0MS01 117 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 TRAV1-2A0A0B4J238 106 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 IGHV1-69DA0A0B4J2H0 117 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 CENPVL3A0A0U1RRI6 287 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A18PA6NE21 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 SLC22A1O15245 554 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 CRTAPO75718 401 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 OR7C1O76099 320 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 IGHV1-69P01742 117 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 CD37P11049 281 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 HTR2CP28335 458 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 P2RX3P56373 397 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 ERVFRD-1P60508 538 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 NEDD8Q15843 81 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 PAN3Q58A45 887 aaKnown RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 SYT6Q5T7P8 510 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 Q8N7P7 452 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 ZNF714Q96N38 554 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 NKX3-1Q99801 234 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 SLC6A7Q99884 636 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 PPIL3Q9H2H8 161 aaKnown RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 PPA2Q9H2U2 334 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 GAL3ST2Q9H3Q3 398 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 HEXA-AS1Q9H8Q6 139 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 OR6C3Q9NZP0 311 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 STUB1Q9UNE7 303 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 SSR3Q9UNL2 185 aa8.9□□□□□ -0.98
HDAC6-211ENST00000443563 UBE2J1Q9Y385 318 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-211ENST00000443563 JMJD1CQ15652 2540 aa8.9□□□□□ -0.99
HDAC6-211ENST00000443563 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 C17orf98A8MV24 154 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 SLC17A2O00624 439 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 GEMIN2O14893 280 aaKnown RBP8.89□□□□□ -0.99
HDAC6-211ENST00000443563 BPNT1O95861 308 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 ZNF728P0DKX0 622 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 MGMTP16455 207 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 FGF9P31371 208 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-211ENST00000443563 UBE2E1P51965 193 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 PAX5Q02548 391 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 AESQ08117 197 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 RBM39Q14498 530 aaKnown RBP8.89□□□□□ -0.99
HDAC6-211ENST00000443563 TIMM50Q3ZCQ8 353 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 KRBOX4Q5JUW0 171 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 ATAD3CQ5T2N8 411 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 TRAPPC6BQ86SZ2 158 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 KCNG3Q8TAE7 436 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 C22orf15Q8WYQ4 148 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 CORO2AQ92828 525 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 SELENOIQ9C0D9 397 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 NCOR1P1Q9H4R4 102 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 ZNF696Q9H7X3 374 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 SIRT7Q9NRC8 400 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 TAS2R3Q9NYW6 316 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 AK6Q9Y3D8 172 aaKnown RBP8.89□□□□□ -0.99
HDAC6-211ENST00000443563 V9GY05 133 aa8.89□□□□□ -0.99
HDAC6-211ENST00000443563 TRAV24A0A0B4J272 114 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms