RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 XCL2Q9UBD3 114 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 SLC35A3Q9Y2D2 325 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 UTP11Q9Y3A2 253 aaKnown RBP3.48□□□□□ -1.85
VPS50-206ENST00000443443 TMEM56-RWDD3S4R434 201 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 NID2Q14112 1375 aa3.48□□□□□ -1.85
VPS50-206ENST00000443443 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 FAM159BA6NKW6 160 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 H7C417 338 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 KPNA4O00629 521 aaPredicted RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 HCRTR1O43613 425 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 C6orf47O95873 294 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 CYB5R3P00387 301 aaPredicted RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 IGKV1D-16P01601 117 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 GKN3PP0CG01 181 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SULT1A3P0DMM9 295 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SULT1A4P0DMN0 295 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 ADRB3P13945 408 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SPNP16150 400 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 TCN2P20062 427 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 KLK2P20151 261 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 PSMB1P20618 241 aaKnown RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 OMGP23515 440 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 CD34P28906 385 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 AGTR1P30556 359 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OR1E2P47887 323 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 RIPPLY3P57055 190 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 CDC42P60953 191 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 RPS23P62266 143 aaKnown RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 CACNG7P62955 275 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SLC7A9P82251 487 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 PSG4Q00888 419 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 IFITM2Q01629 132 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 TCP10Q12799 353 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 PMVKQ15126 192 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 BATFQ16520 125 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 DEFB115Q30KQ5 88 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 TMEM255AQ5JRV8 349 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 STEAP4Q687X5 459 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 CYB5R2Q6BCY4 276 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 REG3GQ6UW15 175 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 DGAT2L6Q6ZPD8 337 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 UBALD2Q8IYN6 164 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SLC35G3Q8N808 338 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 ZNF439Q8NDP4 499 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 KLHL30-AS1Q8NEE0 82 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OR51S1Q8NGJ8 323 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OR10G9Q8NGN4 311 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OR4X1Q8NH49 305 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 GRPEL2Q8TAA5 225 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SPPL2BQ8TCT7 592 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 GEMIN6Q8WXD5 167 aaKnown RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 RGP1Q92546 391 aaPredicted RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 TMBIM1Q969X1 311 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 CLDN23Q96B33 292 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OLFM3Q96PB7 478 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 KIR2DL4Q99706 377 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 ARHGDIGQ99819 225 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 GINS3Q9BRX5 216 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 OR51E2Q9H255 320 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 TAS2R1Q9NYW7 299 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 MTFP1Q9UDX5 166 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 ZNF629Q9UEG4 869 aaPredicted RBP3.47□□□□□ -1.85
VPS50-206ENST00000443443 ANGPT4Q9Y264 503 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SLC22A7Q9Y694 548 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 SCRIBQ14160 1630 aa3.47□□□□□ -1.85
VPS50-206ENST00000443443 IGLV1-36A0A0B4J1U3 117 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 TRAV8-6A0A0B4J262 113 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 TEX50A0A1B0GTY4 177 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 PQLC2LA1A4F0 135 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 FAM220BPB1ANY3 271 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 PFDN1O60925 122 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 CRYZL1O95825 349 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 CSF3P09919 207 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 TFPTP0C1Z6 253 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 OR8U8P0C7N1 319 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 GABRA1P14867 456 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 IGLL1P15814 213 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 RAB3BP20337 219 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 IGHV1-2P23083 117 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 DRD3P35462 400 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 DYNLL1P63167 89 aaKnown RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 GTF2BQ00403 316 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 EMX1Q04741 257 aaPredicted RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 CCL14Q16627 93 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 ACOT6Q3I5F7 207 aaPredicted RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 KLHL12Q53G59 568 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 ZNF684Q5T5D7 378 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 RSBN1Q5VWQ0 802 aaPredicted RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 TEX36Q5VZQ5 186 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 SFXN4Q6P4A7 337 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 C5orf46Q6UWT4 87 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 GRINAQ7Z429 371 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 C6orf120Q7Z4R8 191 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 CALHM3Q86XJ0 350 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 FAM71E2Q8N5Q1 922 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 EIF4E3Q8N5X7 224 aaKnown RBP3.46□□□□□ -1.86
VPS50-206ENST00000443443 TMEM86BQ8N661 226 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 OR1N2Q8NGR9 330 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 OR10J6PQ8NGY7 276 aa3.46□□□□□ -1.86
VPS50-206ENST00000443443 BORCS7Q96B45 105 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms