RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SPRNQ5BIV9 151 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 CLVS2Q5SYC1 327 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 IDNKQ5T6J7 187 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 DDI2Q5TDH0 399 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 DCAF12L2Q5VW00 463 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 RGS7BPQ6MZT1 257 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-206ENST00000441089 WDR86Q86TI4 376 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 NKAIN3Q8N8D7 197 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 CSNK2A3Q8NEV1 391 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OR51D1Q8NGF3 324 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OR5D18Q8NGL1 313 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OR5D14Q8NGL3 314 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 CLDND2Q8NHS1 167 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 LGALS14Q8TCE9 139 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PP6455Q8WZ26 134 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OR5P3Q8WZ94 311 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 RFT1Q96AA3 541 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 SLC25A38Q96DW6 304 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 C1orf147Q96MC9 270 aaPredicted RBP3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PAPOLGQ9BWT3 736 aaKnown RBP3.96□□□□□ -1.78
PTPN4-206ENST00000441089 MRPL37Q9BZE1 423 aaKnown RBP3.96□□□□□ -1.78
PTPN4-206ENST00000441089 BCL2L14Q9BZR8 327 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 OPA3Q9H6K4 179 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 PLEKHA1Q9HB21 404 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 ABCB9Q9NP78 766 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM138Q9NPI0 162 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 A3GALT2U3KPV4 340 aa3.96□□□□□ -1.78
PTPN4-206ENST00000441089 IGHV3-64DA0A0J9YX35 117 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM272A0A1B0GTI8 110 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 A0A1W2PP11 408 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 FAM230AA0A1W2PPH8 454 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RBMY1BA6NDE4 496 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RBMY1EA6NEQ0 496 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 VSTM5A8MXK1 200 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF732B4DXR9 585 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ANGPTL7O43827 346 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TIMM8AO60220 97 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 HPGDSO60760 199 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 KDM4BO94953 1096 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 NDUFA7O95182 113 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 IGHV3-13P01766 116 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 EIF4EP06730 217 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 HCKP08631 526 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RBMY1DP0C7P1 496 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 SELEP16581 610 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 PRKACBP22694 351 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TUBG1P23258 451 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 HTR2CP28335 458 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 SOX6P35712 828 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF93P35789 620 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 GPR6P46095 362 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 POU3F4P49335 361 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 GPM6AP51674 278 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 HOXA4Q00056 320 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 MAB21L1Q13394 359 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 UNC119Q13432 240 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 MADCAM1Q13477 382 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CNN3Q15417 329 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 SLC9A3R2Q15599 337 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 KISS1Q15726 138 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RAB11BQ15907 218 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CEACAM21Q3KPI0 293 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 C2orf76Q3KRA6 126 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF718Q3SXZ3 478 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 PLCXD3Q63HM9 321 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 GLT8D1Q68CQ7 371 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 OR10K2Q6IF99 312 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 METAP1DQ6UB28 335 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CCDC190Q86UF4 302 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RTN4RL2Q86UN3 420 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ANGPTL5Q86XS5 388 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CALHM1Q8IU99 346 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 LAX1Q8IWV1 398 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 C11orf53Q8IXP5 236 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZDHHC23Q8IYP9 409 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 JAGN1Q8N5M9 183 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM104Q8NE00 496 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 OR8G5Q8NG78 346 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 OR10AD1Q8NGE0 317 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 OR6M1Q8NGM8 313 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 SYNPRQ8TBG9 265 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ITFG2Q969R8 447 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 SPSB1Q96BD6 273 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 RNF170Q96K19 258 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 WDFY2Q96P53 400 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 C6orf62Q9GZU0 229 aaPredicted RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF442Q9H7R0 627 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 PLGRKTQ9HBL7 147 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 AKIP1Q9NQ31 210 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TUBG2Q9NRH3 451 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CA10Q9NS85 328 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 TREM2Q9NZC2 230 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 MRPL15Q9P015 296 aaKnown RBP3.95□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF581Q9P0T4 197 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 COMMD3Q9UBI1 195 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CKLFQ9UBR5 152 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 STEAP1Q9UHE8 339 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 NUP50Q9UKX7 468 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms