RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 HIPK2Q9H2X6 1198 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 MCTS1Q9ULC4 181 aaKnown RBP10.35□□□□□ -0.75
LTBR-203ENST00000441074 ZNF292O60281 2723 aa10.35□□□□□ -0.75
LTBR-203ENST00000441074 ADAMTS9Q9P2N4 1935 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 TRBV24-1A0A075B6N3 115 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 HSPA12AO43301 675 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 PITX3O75364 302 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ZNF728P0DKX0 622 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 SUMO3P55854 103 aaPredicted RBP10.34□□□□□ -0.75
LTBR-203ENST00000441074 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 C4orf17Q53FE4 359 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 C16orf47Q6ZP98 133 aaPredicted RBP10.34□□□□□ -0.75
LTBR-203ENST00000441074 DOK3Q7L591 496 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 LGI3Q8N145 548 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 OR2C3Q8N628 320 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 OR5L2Q8NGL0 311 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 CLDND2Q8NHS1 167 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 SNX22Q96L94 193 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 DDA1Q9BW61 102 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 GPR87Q9BY21 358 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 METTL9Q9H1A3 318 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 C11orf1Q9H5F2 150 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 CDH20Q9HBT6 801 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 OCIAD1Q9NX40 245 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ANXA10Q9UJ72 324 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ANKUB1A6NFN9 424 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 AMBPP02760 352 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ASCL1P50553 236 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 HSF1Q00613 529 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
LTBR-203ENST00000441074 SLC10A1Q14973 349 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 KISS1Q15726 138 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 TAF9Q16594 264 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 SLC23A3Q6PIS1 610 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 RABEPKQ7Z6M1 372 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 OR4D5Q8NGN0 318 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 IFI44Q8TCB0 444 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 MSI2Q96DH6 328 aaKnown RBP10.34□□□□□ -0.75
LTBR-203ENST00000441074 REEP6Q96HR9 211 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 CCDC74BQ96LY2 380 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 LIME1Q9H400 295 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 CHST11Q9NPF2 352 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 MED29Q9NX70 200 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ZNF319Q9P2F9 582 aa10.34□□□□□ -0.75
LTBR-203ENST00000441074 ZNF732B4DXR9 585 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 CYTIPO60759 359 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 CYB5R3P00387 301 aaPredicted RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 GCGP01275 180 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 HBE1P02100 147 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 DBHP09172 617 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 FBLP22087 321 aaKnown RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 NOVA1P51513 510 aaKnown RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 ZNF121P58317 390 aaPredicted RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 RPL23AP62750 156 aaKnown RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 POU3F1Q03052 451 aaPredicted RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 ABLIM2Q6H8Q1 611 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 CRIP3Q6Q6R5 217 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 SLC16A14Q7RTX9 510 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 CARFQ8N187 725 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 DUSP23Q9BVJ7 150 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 VN1R1Q9GZP7 353 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 KLHL13Q9P2N7 655 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 LHFPL6Q9Y693 200 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 FAM186AA6NE01 2351 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 FAM24AA6NFZ4 105 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 TMEM225BP0DP42 221 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 RAB4AP20338 218 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 FUT3P21217 361 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 CD200P41217 278 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 TLE3Q04726 772 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 HNF4GQ14541 408 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 C6orf201Q7Z4U5 140 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 OR5D18Q8NGL1 313 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 OR2AJ1Q8NGZ0 328 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 THAP3Q8WTV1 239 aaPredicted RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 DDIT4LQ96D03 193 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 GNPNAT1Q96EK6 184 aaPredicted RBP10.33□□□□□ -0.76
LTBR-203ENST00000441074 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 SYT3Q9BQG1 590 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 OR14J1Q9UGF5 321 aa10.33□□□□□ -0.76
LTBR-203ENST00000441074 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 A0A1B0GU03 582 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 A0A1B0GX78 115 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 EREGO14944 169 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 OPN1MWP04001 364 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 OPN1MW2P0DN77 364 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 OPN1MW3P0DN78 364 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 PNLIPP16233 465 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 GABRR1P24046 479 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 FOXF1Q12946 379 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 DPPA3Q6W0C5 159 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 ASCL5Q7RTU5 278 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 PLEKHJ1Q9NW61 149 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms