RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 OR5M8Q8NGP6 311 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR13A1Q8NGR1 328 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR13C9Q8NGT0 318 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2T35Q8NGX2 323 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR8S1Q8NH09 359 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 KCNG3Q8TAE7 436 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR51E1Q8TCB6 317 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 CCDC107Q8WV48 283 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 SSMEM1Q8WWF3 244 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 ASB13Q8WXK3 278 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 AQP3Q92482 292 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 ADAT3Q96EY9 351 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR2A7Q96R45 310 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 NKX3-1Q99801 234 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 GAL3ST1Q99999 423 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC25A21Q9BQT8 299 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 PIGQQ9BRB3 760 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF416Q9BWM5 594 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 RBM24Q9BX46 236 aaKnown RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 CHIAQ9BZP6 476 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 ARRDC1-AS1Q9H2J1 176 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 EXO5Q9H790 373 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 METTL17Q9H7H0 456 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 PROK2Q9HC23 129 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 SH2D2AQ9NP31 389 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 MYOZ1Q9NP98 299 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 B3GNT2Q9NY97 397 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 PIPOXQ9P0Z9 390 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 MYEF2Q9P2K5 600 aaKnown RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 EIF3KQ9UBQ5 218 aaKnown RBP2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 RHBDD3Q9Y3P4 386 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 CHD9Q3L8U1 2897 aa2.92□□□□□ -1.94
HMGB3P11-201ENST00000440127 TDRD6O60522 2096 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 IGHV3-15A0A0B4J1V0 119 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 A0A0J9YW62 118 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 C13orf42A0A1B0GVH6 325 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR5H15A6NDH6 313 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MEIS3P1A6NDR6 274 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 HMSDA8MTL9 139 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM14DPA8MWL7 114 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 F5H5P2 479 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 G3V3Y1 287 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 L7N2F9 121 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TNFSF11O14788 317 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 NOS1APO75052 506 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MTRF1O75570 445 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRAPPC6AO75865 159 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC22A5O76082 557 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CYB5AP00167 134 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 IFNA7P01567 189 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CD74P04233 296 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 HCKP08631 526 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OR4E1P0C645 316 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF735P0CB33 412 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 UBBP0CG47 229 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SLC2A1P11166 492 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ABOP16442 354 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 KLK2P20151 261 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CNR1P21554 472 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CDX1P47902 265 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 DVL1P1P54792 670 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CARD18P57730 90 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 B3GALT5-AS1P59052 145 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TSPAN5P62079 268 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 QRFPP83859 136 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 HTD2P86397 168 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 DHODHQ02127 395 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ECH1Q13011 328 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 EIF3IQ13347 325 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 UNC119Q13432 240 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ENDOGQ14249 297 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 OPCMLQ14982 345 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZMYND11Q15326 602 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MPPED2Q15777 294 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 LPAL2Q16609 132 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 KIF26BQ2KJY2 2108 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF528Q3MIS6 628 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 MOGAT2Q3SYC2 334 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ACER2Q5QJU3 275 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 PHYHD1Q5SRE7 291 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 PDSS1Q5T2R2 415 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 C6orf183Q5T699 404 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 FAM27BQ5VT28 67 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 H3F3CQ6NXT2 135 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TEX261Q6UWH6 196 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 GLIPR1L1Q6UWM5 242 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 IDO2Q6ZQW0 420 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 CHMP1BQ7LBR1 199 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 AAED1Q7RTV5 226 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TIPARPQ7Z3E1 657 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ABHD12BQ7Z5M8 362 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TRAPPC6BQ86SZ2 158 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 SMIM29Q86T20 159 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 YRDCQ86U90 279 aaKnown RBP2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 NFE4Q86UQ8 179 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF584Q8IVC4 421 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 ZNF101Q8IZC7 436 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 TMEM123Q8N131 208 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 FTMTQ8N4E7 242 aa2.91□□□□□ -1.94
HMGB3P11-201ENST00000440127 BPIFB2Q8N4F0 458 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms