RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TAS2R31P59538 309 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 FAM189A2Q15884 450 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 AWAT1Q58HT5 328 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 ASCL5Q7RTU5 278 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 OR8U1Q8NH10 309 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 TCTEX1D2Q8WW35 142 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 PIGCQ92535 297 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 C10orf35Q96D05 121 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 BORCS8Q96FH0 119 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 ZNF724A8MTY0 619 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 NRASP01111 189 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 LYL1P12980 280 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 HIST1H1DP16402 221 aaKnown RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 BLVRBP30043 206 aaPredicted RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 GSK3AP49840 483 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 RAB32Q13637 225 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 CNN3Q15417 329 aaKnown RBP12.24□□□□□ -0.45
LIMD1-202ENST00000440097 PLAC9Q5JTB6 97 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 TMEM230Q96A57 120 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 C20orf24Q9BUV8 137 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 PRSS50Q9UI38 385 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
LIMD1-202ENST00000440097 C7orf77A4D0Y5 90 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 PI3P19957 117 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 SULT1A2P50226 295 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 NPY4RP50391 375 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 RAB1AP62820 205 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 RSU1Q15404 277 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 TMEM128Q5BJH2 165 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 Q6ZRG5 221 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 CCDC54Q8NEL0 328 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 OR4K15Q8NH41 348 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 WDYHV1Q96HA8 205 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 OR10C1Q96KK4 312 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 FBLN5Q9UBX5 448 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 RAB5AP20339 215 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 OR2B8PP59922 312 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 S100A10P60903 97 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 PLCXD3Q63HM9 321 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 EIF5AL1Q6IS14 154 aaKnown RBP12.23□□□□□ -0.45
LIMD1-202ENST00000440097 CRIP3Q6Q6R5 217 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 CLEC18BQ6UXF7 455 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 GCNT2Q8N0V5 402 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 OCSTAMPQ9BR26 566 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 C5orf66Q9H5L9 145 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
LIMD1-202ENST00000440097 WRBO00258 174 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 GLP1RP43220 463 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 RBP2P50120 134 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 FAM3AP98173 230 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 PLP2Q04941 152 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 C9orf152Q5JTZ5 239 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 FOXRED2Q8IWF2 684 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 SPSB1Q96BD6 273 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 ST6GALNAC5Q9BVH7 336 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 PARP12Q9H0J9 701 aaKnown RBP12.22□□□□□ -0.45
LIMD1-202ENST00000440097 OR51B6Q9H340 312 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 RGCCQ9H4X1 137 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 PARP11Q9NR21 331 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 M0R036 132 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 SFT2D2O95562 160 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
LIMD1-202ENST00000440097 EDN3P14138 238 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 TMEM50BP56557 158 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 CLN3Q13286 438 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 ANKRD55Q3KP44 614 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 NRN1LQ496H8 165 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 HIKESHIQ53FT3 197 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 TERB2Q8NHR7 220 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 SSC4DQ8WTU2 575 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 METTL8Q9H825 291 aaKnown RBP12.22□□□□□ -0.45
LIMD1-202ENST00000440097 ZDHHC11Q9H8X9 412 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 ZNF391Q9UJN7 358 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 SLC7A11Q9UPY5 501 aa12.22□□□□□ -0.45
LIMD1-202ENST00000440097 AP4M1O00189 453 aa12.21□□□□□ -0.45
LIMD1-202ENST00000440097 XRCC2O43543 280 aa12.21□□□□□ -0.45
LIMD1-202ENST00000440097 CEACAM1P13688 526 aa12.21□□□□□ -0.45
LIMD1-202ENST00000440097 EIF5AP63241 154 aaKnown RBP12.21□□□□□ -0.45
LIMD1-202ENST00000440097 FAM24BQ8N5W8 94 aa12.21□□□□□ -0.45
LIMD1-202ENST00000440097 ZNF503-AS2A6NEH8 195 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 DHRS7CA6NNS2 312 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 RPL36A-HNRNPH2H7BZ11 118 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 PPIHO43447 177 aaKnown RBP12.21□□□□□ -0.46
LIMD1-202ENST00000440097 GGACTQ9BVM4 153 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 ZNF701Q9NV72 531 aaPredicted RBP12.21□□□□□ -0.46
LIMD1-202ENST00000440097 PLEKHJ1Q9NW61 149 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 GPR132Q9UNW8 380 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 POMT1Q9Y6A1 747 aa12.21□□□□□ -0.46
LIMD1-202ENST00000440097 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
LIMD1-202ENST00000440097 RAD51DO75771 328 aa12.2□□□□□ -0.46
LIMD1-202ENST00000440097 ARG1P05089 322 aa12.2□□□□□ -0.46
LIMD1-202ENST00000440097 PMELP40967 661 aa12.2□□□□□ -0.46
LIMD1-202ENST00000440097 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms