RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PTGFRP43088 359 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 AESQ08117 197 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 CCDC58Q4VC31 144 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 KRBOX4Q5JUW0 171 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 ZNF691Q5VV52 312 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 LPCAT4Q643R3 524 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 TMEM219Q86XT9 240 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 CORO2AQ92828 525 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 PDCD1LG2Q9BQ51 273 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 SMPD3Q9NY59 655 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-204ENST00000439619 OR6C3Q9NZP0 311 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 DPM3Q9P2X0 92 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 TRRAPQ9Y4A5 3859 aa15.17■□□□□ 0.02
CCDC78-204ENST00000439619 ODAMA1E959 279 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 LEUTXA8MZ59 168 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 GLIPR1P48060 266 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 PRRX1P54821 245 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 MED21Q13503 144 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 ZSCAN26Q16670 478 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 PRAMEF5Q5TYX0 476 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 Q8N2B8 174 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 C11orf44Q8N8P7 122 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 ZNF565Q8N9K5 539 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 GPR148Q8TDV2 347 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 CFHR4Q92496 578 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 ZNF702PQ9H963 129 aa15.16■□□□□ 0.02
CCDC78-204ENST00000439619 MEGF11A6BM72 1044 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 FBXO24O75426 580 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 MYL12AP19105 171 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 DCKP27707 260 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 BDH1Q02338 343 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 EMX1Q04741 257 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 RSU1Q15404 277 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 RPL22L1Q6P5R6 122 aaKnown RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 CCBE1Q6UXH8 406 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 C16orf82Q7Z2V1 217 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 SATL1Q86VE3 508 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 PXT1Q8NFP0 134 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 JAM3Q9BX67 310 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 BARHL1Q9BZE3 327 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 FAM192AQ9GZU8 254 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 FGF20Q9NP95 211 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 CHCHD3Q9NX63 227 aaKnown RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
CCDC78-204ENST00000439619 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-204ENST00000439619 ZNF729A6NN14 1252 aaPredicted RBP15.14■□□□□ 0.01
CCDC78-204ENST00000439619 E9PI62 339 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 H0YJX3 145 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 SLC33A1O00400 549 aaPredicted RBP15.14■□□□□ 0.01
CCDC78-204ENST00000439619 ZP1P60852 638 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 PPP3R1P63098 170 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 ATXN7L3Q14CW9 347 aaPredicted RBP15.14■□□□□ 0.01
CCDC78-204ENST00000439619 LDLRAD2Q5SZI1 272 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 ELP2Q6IA86 826 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 Q6P435 159 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 OR4P4Q8NGL7 312 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 TNFAIP8L1Q8WVP5 186 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 NR1H4Q96RI1 486 aaPredicted RBP15.14■□□□□ 0.01
CCDC78-204ENST00000439619 S100A13Q99584 98 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 C8orf4Q9NR00 106 aa15.14■□□□□ 0.01
CCDC78-204ENST00000439619 OPN1MWP04001 364 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 LIMS3P0CW19 117 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 LIMS4P0CW20 117 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 OPN1MW2P0DN77 364 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 OPN1MW3P0DN78 364 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 C21orf33P30042 268 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-204ENST00000439619 MNDAP41218 407 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 VDAC2P45880 294 aaPredicted RBP15.13■□□□□ 0.01
CCDC78-204ENST00000439619 SOX2P48431 317 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 PAN3Q58A45 887 aaKnown RBP15.13■□□□□ 0.01
CCDC78-204ENST00000439619 TTC23Q5W5X9 447 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 CCDC144NLQ6NUI1 221 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 SETD9Q8NE22 299 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 APH1BQ8WW43 257 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 ZNF649Q9BS31 505 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 PCDHB16Q9NRJ7 776 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 SERTAD4Q9NUC0 356 aa15.13■□□□□ 0.01
CCDC78-204ENST00000439619 MMP23AO75900 390 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 CD34P28906 385 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 KCNJ3P48549 501 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 GTF2A1P52655 376 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-204ENST00000439619 HABP2Q14520 560 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-204ENST00000439619 IL13RA2Q14627 380 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 CDK5R1Q15078 307 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 TMEM106AQ96A25 262 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 LIN7BQ9HAP6 207 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 TMEM138Q9NPI0 162 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 PAK1IP1Q9NWT1 392 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-204ENST00000439619 EXOSC1Q9Y3B2 195 aaKnown RBP15.12■□□□□ 0.01
CCDC78-204ENST00000439619 AMMECR1Q9Y4X0 333 aaPredicted RBP15.12■□□□□ 0.01
CCDC78-204ENST00000439619 VWFP04275 2813 aa15.12■□□□□ 0.01
CCDC78-204ENST00000439619 MEIKINA0A087WXM9 373 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 KBTBD11-OT1A0A1B0GTJ5 212 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 FAM90A22PA8MWA6 464 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 OOSP1A8MZH6 123 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 GABRPO00591 440 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 HSPB6O14558 160 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 CSTBP04080 98 aaKnown RBP15.11■□□□□ 0.01
CCDC78-204ENST00000439619 NFYBP25208 207 aa15.11■□□□□ 0.01
CCDC78-204ENST00000439619 GLP1RP43220 463 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms