RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF788Q6ZQV5 615 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 DCDC5Q6ZRR9 648 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 SLC36A1Q7Z2H8 476 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 ASCC1Q8N9N2 400 aaKnown RBP17.3■□□□□ 0.36
CHD3-204ENST00000439235 ST8SIA4Q92187 359 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 MED30Q96HR3 178 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 TMEM246Q9BRR3 403 aa17.3■□□□□ 0.36
CHD3-204ENST00000439235 TMEM235A6NFC5 223 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 NDUFS8O00217 210 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 HSPB6O14558 160 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 CTDSPLO15194 276 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SIGLEC5O15389 551 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 MELTFP08582 738 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 GIFP27352 417 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 PRSS3P35030 304 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 DSCR9P59020 149 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 IL13RA1P78552 427 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 MRPS15P82914 257 aaKnown RBP17.29■□□□□ 0.36
CHD3-204ENST00000439235 ARFRP1Q13795 201 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 ZNF79Q15937 498 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 HACD4Q5VWC8 232 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 LRRC75A-AS1Q8N1F1 130 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SPICQ8N5J4 248 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 GDPD1Q8N9F7 314 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 MBD6Q96DN6 1003 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SNX22Q96L94 193 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 ABHD1Q96SE0 405 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 CCL13Q99616 98 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SULT4A1Q9BR01 284 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 PIMREGQ9BSJ6 248 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 FAAP24Q9BTP7 215 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SRRQ9GZT4 340 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 SCPEP1Q9HB40 452 aa17.29■□□□□ 0.36
CHD3-204ENST00000439235 UBE2QL1A1L167 161 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 ADAM20O43506 726 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 TFF1P04155 84 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 CD3GP09693 182 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 CD40LGP29965 261 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 RTN4RL2Q86UN3 420 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 FAM168AQ92567 244 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 LURAP1Q96LR2 239 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 FAM234AQ9H0X4 552 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 PPA2Q9H2U2 334 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 ETAA1Q9NY74 926 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 KAAG1Q9UBP8 84 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 METRNQ9UJH8 293 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 KCNK7Q9Y2U2 307 aa17.28■□□□□ 0.36
CHD3-204ENST00000439235 NOTCH2Q04721 2471 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 TMEM82A0PJX8 343 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 SULT1C2O00338 296 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 TNFRSF13BO14836 293 aaPredicted RBP17.27■□□□□ 0.36
CHD3-204ENST00000439235 TMPRSS2O15393 492 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 PSPNO60542 156 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 ZNF737O75373 536 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 CSN2P05814 226 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 AMY2BP19961 511 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 PPP5CP53041 499 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 OLFML2AQ68BL7 652 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 BRICD5Q6PL45 260 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 C17orf107Q6ZR85 190 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 BPIFB2Q8N4F0 458 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 TMEM185AQ8NFB2 350 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 CMSS1Q9BQ75 279 aaKnown RBP17.27■□□□□ 0.36
CHD3-204ENST00000439235 C12orf4Q9NQ89 552 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 AK3Q9UIJ7 227 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 MAB21L2Q9Y586 359 aa17.27■□□□□ 0.36
CHD3-204ENST00000439235 CEACAM18A8MTB9 384 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 GABARAPH6UMI1 98 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 GSTZ1O43708 216 aaPredicted RBP17.26■□□□□ 0.35
CHD3-204ENST00000439235 LPLP06858 475 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 PTHLHP12272 177 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 CBX5P45973 191 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 OR3A1P47881 315 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 GRK1Q15835 563 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 NLRC3Q7RTR2 1065 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 OR8H2Q8N162 312 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 FAM216BQ8N7L0 139 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 ZNRF1Q8ND25 227 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 OR4S1Q8NGB4 309 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 OR5D13Q8NGL4 314 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 SMIM4Q8WVI0 70 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 FCAMRQ8WWV6 532 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 CHST6Q9GZX3 395 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 RIMS4Q9H426 269 aaPredicted RBP17.26■□□□□ 0.35
CHD3-204ENST00000439235 MIOXQ9UGB7 285 aa17.26■□□□□ 0.35
CHD3-204ENST00000439235 H7C1Q1 480 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 K7N7A8 449 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 MGST3O14880 152 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 NDUFB3O43676 98 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 TK1P04183 234 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 RPS2P15880 293 aaKnown RBP17.25■□□□□ 0.35
CHD3-204ENST00000439235 ATXN7L3Q14CW9 347 aaPredicted RBP17.25■□□□□ 0.35
CHD3-204ENST00000439235 TRAPPC6BQ86SZ2 158 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 Q8N402 240 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 C10orf105Q8TEF2 133 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 NUDCD2Q8WVJ2 157 aa17.25■□□□□ 0.35
CHD3-204ENST00000439235 GCDHQ92947 438 aaPredicted RBP17.25■□□□□ 0.35
CHD3-204ENST00000439235 BPESC1Q9GZL8 116 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms