RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 C11orf52Q96A22 123 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 APOBEC3DQ96AK3 386 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 DCUN1D1Q96GG9 259 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 C14orf144Q96I85 54 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 C18orf12Q96KH6 178 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PGLYRP4Q96LB8 373 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 BMFQ96LC9 184 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RDH12Q96NR8 316 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR52B2Q96RD2 323 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PITX2Q99697 317 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 SULT4A1Q9BR01 284 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RNF126Q9BV68 326 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 VDAC3Q9Y277 283 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 BTRCQ9Y297 605 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PKIGQ9Y2B9 76 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 FBXO7Q9Y3I1 522 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF780BQ9Y6R6 833 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 PTPRJQ12913 1337 aa2.86□□□□□ -1.95
HMGB1P12-201ENST00000438594 RIMS1Q86UR5 1692 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 CD109Q6YHK3 1445 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 VPS8Q8N3P4 1428 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 RAPGEF2Q9Y4G8 1499 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 EFCAB5A4FU69 1503 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A087WWV3 80 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A0G2JRQ6 117 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A1B0GXF2 115 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TRABD2BA6NFA1 517 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 EEF1E1-BLOC1S5C9J1V9 151 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TRAPPC2LH3BP13 241 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 EEF1E1O43324 174 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 CCDC22O60826 627 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 REM1O75628 298 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 UPK1BO75841 260 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TSHBP01222 138 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 C1QBP02746 253 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TTRP02766 147 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 CD79AP11912 226 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 HSD17B1P14061 328 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF25P17030 456 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ATF1P18846 271 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TCN2P20062 427 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 RAB3AP20336 220 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PSMB9P28065 219 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 GLRXP35754 106 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 MTPNP58546 118 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 CACNG7P62955 275 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 RELAQ04206 551 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF616Q08AN1 781 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PMVKQ15126 192 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 NRF1Q16656 503 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TTC32Q5I0X7 151 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMEM255AQ5JRV8 349 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PAGE3Q5JUK9 113 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM162BQ5T6X4 162 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 SPATA31B1PQ5VZV4 182 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 NANOGP8Q6NSW7 305 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 SLC22A18ASQ8N1D0 253 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF441Q8N8Z8 693 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF485Q8NCK3 441 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR4M1Q8NGD0 313 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR4D11Q8NGI4 311 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR1S1Q8NH92 325 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 GNPDA2Q8TDQ7 276 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMEM203Q969S6 136 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 GMPPAQ96IJ6 420 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF300Q96RE9 604 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 EFCAB11Q9BUY7 163 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 SUCNR1Q9BXA5 334 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 SLC17A9Q9BYT1 436 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 RBM38Q9H0Z9 239 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 RNASE7Q9H1E1 156 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PANK3Q9H999 370 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 NANOGQ9H9S0 305 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 CISHQ9NSE2 258 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMEM100Q9NV29 134 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 C14orf105Q9NVL8 296 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 MRPL27Q9P0M9 148 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 TAAR2Q9P1P5 351 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 COPZ2Q9P299 210 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 PRNDQ9UKY0 176 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 YTHDF2Q9Y5A9 579 aaKnown RBP2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 KCNE3Q9Y6H6 103 aa2.85□□□□□ -1.95
HMGB1P12-201ENST00000438594 ARHGEF11O15085 1522 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 WDR62O43379 1518 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A087WYN8 130 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 SAA2-SAA4A0A096LPE2 208 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 TEX50A0A1B0GTY4 177 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR5H14A6NHG9 310 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM25AB3EWG3 89 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM25CB3EWG5 89 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM25GB3EWG6 89 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 C12orf77C9JDV5 145 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 C8orf87E5RJ46 101 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 K7EQS6 105 aa2.84□□□□□ -1.95
HMGB1P12-201ENST00000438594 CHST10O43529 356 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms