RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 FAM90A8PA6NJQ4 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A7PA6NKC0 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A22PA8MWA6 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A12PA8MX19 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A5PA8MXJ8 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A23PA8MXZ1 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 MFNGO00587 321 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 DEGS1O15121 323 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CTDSPLO15194 276 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 GSTZ1O43708 216 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SSX5O60225 188 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 NDUFS7O75251 213 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 RP2O75695 350 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SCGNO76038 276 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 OR2H2O95918 312 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 KNG1P01042 644 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 MELTFP08582 738 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A15PP0C7V4 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A13PP0C7W8 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A14PP0C7W9 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A24PP0C7X0 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 PSG2P11465 335 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 HIST1H1DP16402 221 aaKnown RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FUT3P21217 361 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 GLRA1P23415 457 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CD40LGP29965 261 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CD80P33681 288 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CDKN1AP38936 164 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CEBPDP49716 269 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 DGCR2P98153 550 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 PITPNAQ00169 270 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SCN1BQ07699 218 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 IL13RA2Q14627 380 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 MPV17LQ2QL34 196 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SPIN3Q5JUX0 258 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 TEX36Q5VZQ5 186 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 HIST2H2BCQ6DN03 193 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SFRP4Q6FHJ7 346 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 Q6ZTK2 550 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 C6orf201Q7Z4U5 140 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM90A1Q86YD7 464 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CD177Q8N6Q3 437 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 GDPD1Q8N9F7 314 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 OR5T2Q8NGG2 359 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 NEU4Q8WWR8 484 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 ST8SIA4Q92187 359 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 CCL17Q92583 94 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SULT4A1Q9BR01 284 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 FAAP24Q9BTP7 215 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 SEBOXQ9HB31 216 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM106BQ9NUM4 274 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 RCC2Q9P258 522 aaKnown RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 NLKQ9UBE8 527 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 RABL2AQ9UBK7 228 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 HSF4Q9ULV5 492 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 RABL2BQ9UNT1 228 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 WIPI2Q9Y4P8 454 aa5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 RP1L1Q8IWN7 2480 aaPredicted RBP5.88□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM235A6NFC5 223 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 RFPL4AA6NLU0 287 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 LRRC30A6NM36 301 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 OR2AT4A6NND4 320 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 RFPL4AL1F8VTS6 287 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 IFNL4K9M1U5 179 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 LGALS8O00214 317 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 SLC33A1O00400 549 aaPredicted RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 SH2D1BO14796 132 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 TNFRSF13BO14836 293 aaPredicted RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 LANCL1O43813 399 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PDCD6O75340 191 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 OR7C1O76099 320 aaPredicted RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 HAND1O96004 215 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 CD3GP09693 182 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 CSF3P09919 207 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 IL7P13232 177 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 IRF2P14316 349 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 DAOP14920 347 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 LMO1P25800 156 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PRDX2P32119 198 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PRSS3P35030 304 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 KRTAP10-9P60411 292 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 MRPS11P82912 194 aaKnown RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 HFEQ30201 348 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 SMIM21Q3B7S5 101 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 RNASE12Q5GAN4 147 aaKnown RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 ATAD3CQ5T2N8 411 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 HACD4Q5VWC8 232 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 STUMQ69YW2 141 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 LINC00596Q86U02 117 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 Q8N402 240 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 BPIFB2Q8N4F0 458 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 SUMF2Q8NBJ7 301 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 DEFB108BQ8NET1 73 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 OR52I2Q8NH67 350 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 ANGPTL6Q8NI99 470 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 GPX8Q8TED1 209 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 C15orf40Q8WUR7 153 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms