RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
TOP3B-206ENST00000436282 SDK2Q58EX2 2172 aa12.94□□□□□ -0.34
TOP3B-206ENST00000436282 LOC102725191A0A1B0GVB3 256 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 ZNF732B4DXR9 585 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 M0R135 149 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 SPRY1O43609 319 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 ZFAND5O76080 213 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 PTBP3O95758 552 aaKnown RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 PTGDSP41222 190 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 CLDN17P56750 224 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 SRPXP78539 464 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 DYRK2Q92630 601 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 RBMXL1Q96E39 390 aaKnown RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 ZNF799Q96GE5 643 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 NKX2-6A6NCS4 301 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 HERV-K104P61576 105 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 REC114Q7Z4M0 266 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 GNPNAT1Q96EK6 184 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 DEFB126Q9BYW3 111 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-206ENST00000436282 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
TOP3B-206ENST00000436282 TRDCB7Z8K6 153 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 OMGP23515 440 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 PKIAP61925 76 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 C20orf196Q8IYI0 205 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 TMEM252Q8N6L7 170 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-206ENST00000436282 SLC7A11Q9UPY5 501 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 FRYLO94915 3013 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 C3orf85A0A1B0GTC6 90 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 B4DEV8 164 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 ONECUT2O95948 504 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 PNLIPP16233 465 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 GAMTQ14353 236 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 PDZD11Q5EBL8 140 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 C10orf128Q5T292 105 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 OR2T2Q6IF00 324 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 OR10AD1Q8NGE0 317 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 CLDND2Q8NHS1 167 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 DUSP23Q9BVJ7 150 aa12.92□□□□□ -0.34
TOP3B-206ENST00000436282 LY6G6EA0A0G2JKS1 128 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 FAM221AA4D161 298 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TOX3O15405 576 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 IFNA10P01566 189 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 HBE1P02100 147 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CFIP05156 583 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CELA2AP08217 269 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 AADACP22760 399 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 FOXL2NBQ6ZUU3 175 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 SUMF1Q8NBK3 374 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 M1APQ8TC57 530 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 NABP1Q96AH0 204 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 HIPK2Q9H2X6 1198 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 U3KQA8 63 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 WDFY3Q8IZQ1 3526 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 IGKV1-27A0A075B6S5 117 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 A0A1B0GV90 55 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 MPPED1O15442 326 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 VAMP2P63027 116 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 RSPO4Q2I0M5 234 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 HLA-BQ31612 363 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 SNAI3Q3KNW1 292 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 AKR1C8PQ5T2L2 129 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 ZNF100Q8IYN0 542 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CPNE4Q96A23 557 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CLDN23Q96B33 292 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TMEM222Q9H0R3 208 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 GLRX2Q9NS18 164 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 PTRH2Q9Y3E5 179 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 GEMIN2O14893 280 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TGOLN2O43493 480 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 SSSCA1O60232 199 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CEACAM1P13688 526 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 DDTP30046 118 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 RPL23AP62750 156 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 TLE4Q04727 773 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
TOP3B-206ENST00000436282 Q3ZCU0 254 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 PHYHD1Q5SRE7 291 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 CDCP2Q5VXM1 449 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 ASCL4Q6XD76 172 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
TOP3B-206ENST00000436282 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms