RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SLC5A7Q9GZV3 580 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 CDH20Q9HBT6 801 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
LIMK1-203ENST00000435201 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
LIMK1-203ENST00000435201 J3QT63 122 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 SMPD2O60906 423 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 DEDDO75618 318 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 CTXN2P0C2S0 81 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 GUSBP1Q15486 140 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 IGSF11Q5DX21 431 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 ZNF585AQ6P3V2 769 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 FAM58AQ8N1B3 248 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 C18orf12Q96KH6 178 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 RTL8AQ9BWD3 113 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 OR51I2Q9H344 312 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 IL36RNQ9UBH0 155 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 TRDCB7Z8K6 153 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 H7C1Q1 480 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 FGF16O43320 207 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 HOXB1P14653 301 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-203ENST00000435201 CA6P23280 308 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 SRPXP78539 464 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 SP6Q3SY56 376 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 C1QTNF12Q5T7M4 302 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 INO80CQ6PI98 192 aaPredicted RBP14.29□□□□□ -0.12
LIMK1-203ENST00000435201 Q6ZT83 130 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 SARAFQ96BY9 339 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 IFT22Q9H7X7 185 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 TMA7Q9Y2S6 64 aaKnown RBP14.29□□□□□ -0.12
LIMK1-203ENST00000435201 ATP23Q9Y6H3 246 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 TTC28Q96AY4 2481 aa14.29□□□□□ -0.12
LIMK1-203ENST00000435201 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 TRBV6-6A0A0A6YYG2 114 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 ZSCAN5BA6NJL1 495 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 B8ZZF3 427 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 TEX46H3BTG2 121 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 HKR1P10072 659 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 WT1P19544 449 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-203ENST00000435201 IL32P24001 234 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 PPP1CBP62140 327 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 SPATA46Q5T0L3 261 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 FOXRED2Q8IWF2 684 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 GCNT2Q8N0V5 402 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 SUMF2Q8NBJ7 301 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 RNF141Q8WVD5 230 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 MSI2Q96DH6 328 aaKnown RBP14.28□□□□□ -0.12
LIMK1-203ENST00000435201 PRRX2Q99811 253 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 ZC4H2Q9NQZ6 224 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 TAS2R3Q9NYW6 316 aa14.28□□□□□ -0.12
LIMK1-203ENST00000435201 K7EPK0 472 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 SLC34A2O95436 690 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 IDH3GP51553 393 aaPredicted RBP14.27□□□□□ -0.12
LIMK1-203ENST00000435201 RND3P61587 244 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 GABRA6Q16445 453 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 FAM209AQ5JX71 171 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 FAM71E2Q8N5Q1 922 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 OR11L1Q8NGX0 322 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 PIGMQ9H3S5 423 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 TMEM100Q9NV29 134 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 TMED3Q9Y3Q3 217 aa14.27□□□□□ -0.12
LIMK1-203ENST00000435201 PTPRBP23467 1997 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 LRP5LA4QPB2 252 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF891A8MT65 544 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-203ENST00000435201 LGALS8O00214 317 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 MPPED1O15442 326 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 PHF1O43189 567 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-203ENST00000435201 SCO1O75880 301 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 LYZL6O75951 148 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 CELA3BP08861 270 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 SELEP16581 610 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 DUSP1P28562 367 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 RPL12P30050 165 aaKnown RBP14.27□□□□□ -0.13
LIMK1-203ENST00000435201 TSC22D1Q15714 1073 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 TUSC1Q2TAM9 212 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 EIF5AL1Q6IS14 154 aaKnown RBP14.27□□□□□ -0.13
LIMK1-203ENST00000435201 Q8IYB0 196 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF565Q8N9K5 539 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 GALNT11Q8NCW6 608 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 WNT2BQ93097 391 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF488Q96MN9 340 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 PLEKHA2Q9HB19 425 aa14.27□□□□□ -0.13
LIMK1-203ENST00000435201 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.13
LIMK1-203ENST00000435201 C3orf85A0A1B0GTC6 90 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 E5RGE8 158 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 HSPB6O14558 160 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 BET1O15155 118 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 SCTP09683 121 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 RAC2P15153 192 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 KCNJ3P48549 501 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 OR2A2Q6IF42 318 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 UQCC3Q6UW78 93 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 LYZL2Q7Z4W2 148 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 MYPOPQ86VE0 399 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-203ENST00000435201 FAM219AQ8IW50 185 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 C1orf162Q8NEQ5 155 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-203ENST00000435201 MRPL30Q8TCC3 161 aaKnown RBP14.26□□□□□ -0.13
LIMK1-203ENST00000435201 BOD1Q96IK1 185 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 DOCK7Q96N67 2140 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 OR2J1Q9GZK6 312 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms