RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 RNF150Q9ULK6 438 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
DDX56-205ENST00000433257 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 IGHV3-20A0A0C4DH32 117 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 C3orf85A0A1B0GTC6 90 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 CTXN2P0C2S0 81 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 TCN2P20062 427 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 RPS10P46783 165 aaKnown RBP12.8□□□□□ -0.36
DDX56-205ENST00000433257 UBE2KP61086 200 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 TMEM42Q69YG0 159 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 FAAP24Q9BTP7 215 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 DEFB126Q9BYW3 111 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 C11orf1Q9H5F2 150 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 ADAMTS20P59510 1910 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 A0A1W2PPE2 198 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 A0A1W2PPE3 182 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 SHISA8B8ZZ34 492 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 MPPED1O15442 326 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 MYF5P13349 255 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 CRYGSP22914 178 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 ACP1P24666 158 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 OR2B8PP59922 312 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 SSTP61278 116 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 PCBD1P61457 104 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 IL24Q13007 206 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 ACSF3Q4G176 576 aaPredicted RBP12.8□□□□□ -0.36
DDX56-205ENST00000433257 AKR1C8PQ5T2L2 129 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 ZNF695Q8IW36 515 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 TMEM123Q8N131 208 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 GPR137CQ8N3F9 429 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 OR10G3Q8NGC4 313 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
DDX56-205ENST00000433257 NAT6Q93015 286 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 SGK3Q96BR1 496 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 REEP6Q96HR9 211 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 GGACTQ9BVM4 153 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 GPR173Q9NS66 373 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 DKKL1Q9UK85 242 aa12.8□□□□□ -0.36
DDX56-205ENST00000433257 NXT1Q9UKK6 140 aaKnown RBP12.8□□□□□ -0.36
DDX56-205ENST00000433257 PUS1Q9Y606 427 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX56-205ENST00000433257 SPAARA0A1B0GVQ0 90 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 LRP5LA4QPB2 252 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 H3BQ15 152 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 IFNA10P01566 189 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
DDX56-205ENST00000433257 SLC25A6P12236 298 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 FUT3P21217 361 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 TAGLN2P37802 199 aaKnown RBP12.79□□□□□ -0.36
DDX56-205ENST00000433257 CFHR1Q03591 330 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 TAF9Q16594 264 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 OR5L1Q8NGL2 311 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 RELTQ969Z4 430 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 PFDN5Q99471 154 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 WDR77Q9BQA1 342 aaPredicted RBP12.79□□□□□ -0.36
DDX56-205ENST00000433257 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
DDX56-205ENST00000433257 FOXD3Q9UJU5 478 aaPredicted RBP12.79□□□□□ -0.36
DDX56-205ENST00000433257 UBE2J1Q9Y385 318 aaPredicted RBP12.79□□□□□ -0.36
DDX56-205ENST00000433257 OR5H15A6NDH6 313 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 XRCC2O43543 280 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
DDX56-205ENST00000433257 DKK1O94907 266 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 NRASP01111 189 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 PPYP01298 95 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 ARG1P05089 322 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 ATP6V0CP27449 155 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 DSCR4P56555 118 aaPredicted RBP12.78□□□□□ -0.36
DDX56-205ENST00000433257 CLDN15P56746 228 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 FXYD4P59646 89 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 NHLH2Q02577 135 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 CHAF1BQ13112 559 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 SP6Q3SY56 376 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
DDX56-205ENST00000433257 C20orf196Q8IYI0 205 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 OR52M1Q8NGK5 317 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
DDX56-205ENST00000433257 RARRES3Q9UL19 164 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
DDX56-205ENST00000433257 RP1P56715 2156 aa12.78□□□□□ -0.36
DDX56-205ENST00000433257 PCNX2A6NKB5 2137 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 LY6G6EA0A0G2JKS1 128 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 ZNF587BE7ETH6 402 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 MSTNO14793 375 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 OR2J2O76002 312 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 SCAF4O95104 1147 aaKnown RBP12.77□□□□□ -0.36
DDX56-205ENST00000433257 VDAC1P21796 283 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 PPP1CCP36873 323 aaKnown RBP12.77□□□□□ -0.36
DDX56-205ENST00000433257 GLIPR1P48060 266 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 NKX6-1P78426 367 aaPredicted RBP12.77□□□□□ -0.36
DDX56-205ENST00000433257 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 GUSBP11Q6P575 273 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 ZNF429Q86V71 674 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 SAXO1Q8IYX7 474 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms