RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GLIPR1P48060 266 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 AESQ08117 197 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 THNSL2Q86YJ6 484 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ADAT3Q96EY9 351 aaPredicted RBP11.82□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF649Q9BS31 505 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 COMMD4Q9H0A8 199 aa11.82□□□□□ -0.52
PRKDC-203ENST00000432581 G3V2T6 193 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 GYG2O15488 501 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 KDM4BO94953 1096 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF44P15621 663 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 GDNFP39905 211 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 KIR3DL2P43630 455 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 OR3A4PP47883 348 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 THBS3P49746 956 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 ISL1P61371 349 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
PRKDC-203ENST00000432581 TMED1Q13445 227 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
PRKDC-203ENST00000432581 KRBOX4Q5JUW0 171 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 KDM4DQ6B0I6 523 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 RDH10Q8IZV5 341 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 CHPT1Q8WUD6 406 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 RPEQ96AT9 228 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 FGGYQ96C11 551 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 OPALINQ96PE5 141 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 GNG8Q9UK08 70 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 POMPQ9Y244 141 aa11.81□□□□□ -0.52
PRKDC-203ENST00000432581 AMMECR1Q9Y4X0 333 aaPredicted RBP11.81□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF729A6NN14 1252 aaPredicted RBP11.8□□□□□ -0.52
PRKDC-203ENST00000432581 APOL3O95236 402 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 UNQ9370/PRO34162Q6UXP9 181 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 OR2W3Q7Z3T1 314 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 ZDHHC13Q8IUH4 622 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 OR2G2Q8NGZ5 317 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 OR9G1Q8NH87 305 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 RFKQ969G6 155 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 TOMM40LQ969M1 308 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 GABARAPL1Q9H0R8 117 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
PRKDC-203ENST00000432581 IGKV1-12A0A0C4DH73 117 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 KBTBD11-OT1A0A1B0GTJ5 212 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 IGKV1D-12P01611 117 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 MT-ND2P03891 347 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 ISG15P05161 165 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 MYCNOSP40205 109 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 SCN1BQ07699 218 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 ATP6AP1Q15904 470 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF329Q86UD4 541 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 SAXO1Q8IYX7 474 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 COMMD1Q8N668 190 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 OR8J1Q8NGP2 316 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 RFT1Q96AA3 541 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 COQ2Q96H96 371 aa11.79□□□□□ -0.52
PRKDC-203ENST00000432581 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 NUDT19A8MXV4 375 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-203ENST00000432581 DEGS1O15121 323 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 FGF16O43320 207 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
PRKDC-203ENST00000432581 NHLRC4P0CG21 123 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-203ENST00000432581 NFYBP25208 207 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 GP2P55259 537 aaKnown RBP11.78□□□□□ -0.52
PRKDC-203ENST00000432581 SLC35B1P78383 322 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF85Q03923 595 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 BNIP1Q12981 228 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 Q6P435 159 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 C8orf86Q6ZUL3 223 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 ZNF565Q8N9K5 539 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 OR56B4Q8NH76 319 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 RNF166Q96A37 237 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-203ENST00000432581 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
PRKDC-203ENST00000432581 CCDC159P0C7I6 412 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 TMEM11P17152 192 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 FASP25445 335 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 RAB7AP51149 207 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 DGCR2P98153 550 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 MADCAM1Q13477 382 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 HES1Q14469 280 aa11.77□□□□□ -0.53
PRKDC-203ENST00000432581 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms