RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 ATP4BP51164 291 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 PRKXP51817 358 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTBP60709 375 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTA2P62736 377 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTG1P63261 375 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTG2P63267 376 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTC1P68032 377 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTA1P68133 377 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 SLC35A2P78381 396 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OGDHQ02218 1023 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF154Q13106 437 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OR8G1Q15617 311 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 TRAM1Q15629 374 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 DEFB113Q30KQ7 82 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACTBL2Q562R1 376 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 PRAMEF20Q5VT98 475 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 FBXW9Q5XUX1 488 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OLFML2AQ68BL7 652 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 C1orf94Q6P1W5 598 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 PAMR1Q6UXH9 720 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CASP12Q6UXS9 341 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 TIFABQ6ZNK6 161 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 LRRC18Q8N456 261 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 HSD17B11Q8NBQ5 300 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ACBD4Q8NC06 268 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 C17orf47Q8NEP4 570 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OR5K1Q8NHB7 308 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 NEK7Q8TDX7 302 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CYGBQ8WWM9 190 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 UCN3Q969E3 161 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 COX14Q96I36 57 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OR2M2Q96R28 347 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 PRRT1Q99946 306 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 CMSS1Q9BQ75 279 aaKnown RBP3.22□□□□□ -1.89
HMGB3-203ENST00000430118 TIMM29Q9BSF4 260 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 PARD6GQ9BYG4 376 aaPredicted RBP3.22□□□□□ -1.89
HMGB3-203ENST00000430118 EXO5Q9H790 373 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 MIEF1Q9NQG6 463 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 TREX1Q9NSU2 369 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 SLC2A8Q9NY64 477 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 NUDT4Q9NZJ9 180 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 STOX2Q9P2F5 926 aaPredicted RBP3.22□□□□□ -1.89
HMGB3-203ENST00000430118 ZNF580Q9UK33 172 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 OR52A1Q9UKL2 312 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 MOKQ9UQ07 419 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 V9GYH0 126 aa3.22□□□□□ -1.89
HMGB3-203ENST00000430118 DIDO1Q9BTC0 2240 aaKnown RBP3.21□□□□□ -1.89
HMGB3-203ENST00000430118 POLEQ07864 2286 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 A0A0A6YYH2 397 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1W2PPE3 182 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FABP12A6NFH5 140 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 A6NJ64 397 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 C5orf58C9J3I9 102 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FOXE1O00358 373 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TP53I11O14683 189 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 RS1O15537 224 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FABP7O15540 132 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 AIREO43918 545 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 KLF7O75840 302 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 DUS4LO95620 317 aaKnown RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 APOC3P02656 99 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CRYBA1P05813 215 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OR8U8P0C7N1 319 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 UCHL3P15374 230 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 RCC1P18754 421 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 NPR2P20594 1047 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SERPINA2P20848 420 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 STOMP27105 288 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CD1BP29016 333 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FMO3P31513 532 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SHMT2P34897 504 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SLC1A2P43004 574 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 RORCP51449 518 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TPI1P60174 286 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 RPS20P60866 119 aaKnown RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 NCS1P62166 190 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 VLDLRP98155 873 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 EMX1Q04741 257 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FABP9Q0Z7S8 132 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SERTAD2Q14140 314 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 PRPSAP1Q14558 356 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 USF2Q15853 346 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF79Q15937 498 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 KCTD19Q17RG1 926 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TIGITQ495A1 244 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 GLYR1Q49A26 553 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 FAM120AOSQ5T036 256 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OTUD3Q5T2D3 398 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CARD17Q5XLA6 110 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SAXO2Q658L1 398 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 LPCAT3Q6P1A2 487 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ULK3Q6PHR2 472 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 KCNIP4Q6PIL6 250 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 PAQR6Q6TCH4 344 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 EPGNQ6UW88 154 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 LRRN1Q6UXK5 716 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TMPRSS11AQ6ZMR5 421 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 C16orf47Q6ZP98 133 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 MYPOPQ86VE0 399 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SLC26A11Q86WA9 606 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms